5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr1:1772348:1772381:[-] | chr11:65200827:65200873:[+] | nonBSJ supported | Exon |
circRNA 5': UCCAGC------------CUGGUGACAGAGCGAGACUGCU-GUCUCA 3' ||||:| || |: | || ||| || |:||| target 3':AAGGUUGUCUCUCUUAUAAGAACGGAAUGUC-CUCACAAGAUCGGAGG 5' |
-18.60 | 1 | RIC-seq |
| chr1:1772349:1772371:[-] | chr11:65200847:65200870:[+] | nonBSJ supported | Exon |
circRNA 5':UGACAGAGCGAGACUGC-UGUCUC 3' ||||||| ||: | ||:|| target 3':GUUGUCUCUCUUAUAAGAACGGAA 5' |
-15.90 | 1 | RIC-seq |
| chr1:1772654:1772693:[-] | chr11:65195960:65196004:[+] | nonBSJ supported | Exon |
circRNA 5':AUCAUGCCACUGCACUCCAGCCA----GGGUG----ACAGAGUGAGAA 3' ||||||| :||||| :||| |:||: |||:||: ||| target 3':AAGUACGG--GCGUGACG-UGGUAUUACUCAUGGUGUGUUUCGGUCUC 5' |
-38.10 | 1 | RIC-seq |
| chr1:1773386:1773425:[-] | chr11:65208533:65208573:[+] | nonBSJ supported | Exon |
circRNA 5':AUAGACCACAUUUUAUUCAUCCAUU--CAUGCUCAGUGGGUA 3' || || |||||:|||||:|| | |||| :||::| target 3':AAUAGGG-GUAAAGUAAGUGGGCCUUUGAACGAAGUACUUAA 5' |
-31.30 | 5 | RIC-seq |
| chr1:1774427:1774445:[-] | chr11:65211885:65211904:[+] | nonBSJ supported | Exon |
circRNA 5':UCCUCCU-GGGGACACACAC 3' ||| || :|||||||||| target 3':UGGACGAGUCCCUGUGUGUA 5' |
-24.20 | 2 | RIC-seq |
| chr1:1776282:1776339:[-] | chr11:65207890:65207934:[+] | nonBSJ supported | Exon |
circRNA 5':CUUGGGGCUGGAUGUUUUCCGGAAUAUAGACU-UUUUCAGGGUUGAGAAAGAUGCAGUG 3' |||:|:| :| :||:| ||| || |: :||:||:|| || | ||||||| target 3':AAACUCUG-UC-GCAGA---------AUCAGACAGCGGUUCCGAC-CU--C-ACGUCACC 5' |
-32.40 | 1 | RIC-seq |
| chr1:1776672:1776684:[-] | chr11:65190412:65190422:[+] | nonBSJ supported | Exon |
circRNA 5':ACUCUAUUUGCCC 3' |||: ||||| target 3':AGAGG--AACGGU 5' |
-10.30 | 1 | RIC-seq |
| chr1:1776672:1776702:[-] | chr11:65190412:65190430:[+] | nonBSJ supported | Exon |
circRNA 5':UGACGCUUAAAUUUCAGAACUCUAUUUGCCC 3' ||| || || |||: ||||| target 3':UCUG-GA--------UCA-GAGG--AACGGU 5' |
-10.70 | 1 | RIC-seq |
| chr1:1778591:1778613:[-] | chr11:65194648:65194672:[+] | nonBSJ supported | Exon |
circRNA 5':UGCACAAAGCAGUAGAGUU--GGCC 3' ||||| |:|||:|| |: |:| target 3':UUGUGUCUUGUCGUCACGUUCCUGU 5' |
-19.20 | 1 | RIC-seq |
| chr1:1779548:1779599:[-] | chr11:65197462:65197511:[+] | nonBSJ supported | Exon |
circRNA 5':UGGUCUGC--CCGCUU---UGGCCUCCCAAAGUGCUGGGAGUACAGGCCUGAGCCAC 3' ||||:: ||:||: ||| ||:|| |:|||| |||| ::||| || target 3':UCCAGGUUUAGGUGAGUCUACCCC-----UUUAC--CUCUCA-GUCCCUGUUCGUUGU 5' |
-33.40 | 1 | RIC-seq |
| chr1:1779687:1779734:[-] | chr11:65195328:65195368:[+] | nonBSJ supported | Exon |
circRNA 5':GCGGUUUUCCUGCUUCAGCCUCCCAAGUAGCUGG-GAUUACAGGCGCCC 3' |::||: ||||||| || ||| ||||| ||: :||:|| target 3':AGUUAAGAA---GAAGUCGUACGG-UCAACGACCUCUG----UCGUGGU 5' |
-37.70 | 3 | RIC-seq |
| chr1:1779884:1779909:[-] | chr11:65195164:65195190:[+] | nonBSJ supported | Exon |
circRNA 5':GGAAGGGG--AGGUAGGAGAGACAGGCA 3' ||||||| ||:|||||:|| |||| target 3':GUUUCCCCAUUCUAUCCUUUCC-UCCGG 5' |
-32.40 | 1 | RIC-seq |
| chr1:1782898:1782949:[-] | chr11:65207035:65207086:[+] | nonBSJ supported | Exon |
circRNA 5':AUCCCAGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUA 3' ||| |||||||| |||:||| ||||||||||||||||| |||||| ||| target 3':GAGGACCCAAGUUCACUAGGAGCACGGAGUCGGAGGACUCUUCGACCAUAAU 5' |
-79.00 | 1 | RIC-seq |
| chr1:1782953:1782979:[-] | chr11:65207757:65207781:[+] | nonBSJ supported | Exon |
circRNA 5':GCUGUGUCGCCCAGGCUGGAGUGCAGU 3' |||||||: ||:: |::|: ||| target 3':AGACACAGUU-GUUUUAUUUUGAGUC 5' |
-17.20 | 1 | RIC-seq |
| chr1:1782958:1782979:[-] | chr11:65207761:65207781:[+] | nonBSJ supported | Exon |
circRNA 5':GCUGUGUCGCCCAGGCUGGAGU 3' |||||||: ||:: |::|: target 3':AGACACAGUU-GUUUUAUUUUG 5' |
-13.50 | 2 | RIC-seq |
| chr1:1784359:1784373:[-] | chr11:65200534:65200547:[+] | nonBSJ supported | Exon |
circRNA 5':GUACAUUCAGGGAAA 3' |||| :|| |||| target 3':GAUGU-GGUACCUUA 5' |
-8.70 | 1 | RIC-seq |
| chr1:1785539:1785576:[-] | chr11:65204222:65204257:[+] | nonBSJ supported | Exon |
circRNA 5':AUAAAGACUUGCACUGUUCGCUUAAUGCCUUCCUCGAC 3' ||||:| |||| :||||||| ||||:|:| target 3':CAUUUUU-AACGACUUUGUUGAAUUACC-AAGGGGUUU 5' |
-22.10 | 2 | RIC-seq |
| chr1:1788630:1788658:[-] | chr11:65193491:65193521:[+] | nonBSJ supported | Exon |
circRNA 5':CCUCUCCCCAC--UUCCCAGUGAGAA-CCUUG 3' |||||||||| |:|||| |||| target 3': GAGAGGGGUGUUAGGGGUAGGGGAAGGGAAA 5' |
-32.30 | 2 | RIC-seq |
| chr1:1789802:1789833:[-] | chr11:65201864:65201900:[+] | nonBSJ supported | Exon |
circRNA 5':AUAUGGCUUCUAUGGUACAA-----GUGGAAUUUGUC 3' ||: :|||||||:| :|| ||: :|| target 3':AAUGGUGAAGAUAUCUUUUCUUUGGUACGUUGUGCAA 5' |
-19.50 | 2 | RIC-seq |
| chr1:1790281:1790329:[-] | chr11:65196260:65196302:[+] | nonBSJ supported | Exon |
circRNA 5':AUGUU-GAUUUC-AUGCAGAGCUUGCUUUUUUAUCACAGCAGCCACUGCAA 3' |:|| || :|| ||| |||: ||: |||| || || ||| target 3': AUAAUCUUGAGUUACUUCUU-AAU----AAAUUUUCUC-UCCUUUCCGU 5' |
-7.90 | 1 | RIC-seq |
| chr1:1790403:1790440:[-] | chr11:65205337:65205368:[+] | nonBSJ supported | Exon |
circRNA 5': GGAAACUGUAUUUUAUUUUUAAAUAGCCACAAUUACUA 3' ||| |:||||:| :| :||| :|||| ||| target 3':CCCU----CGUAAAGUUGACGUUUC-UGGUGACU-UGA 5' |
-15.40 | 2 | RIC-seq |
| chr1:1790640:1790693:[-] | chr11:65197496:65197545:[+] | nonBSJ supported | Exon |
circRNA 5':AGGUCAGGAAUUCGAGACCAGCCUGGCCAACAUUGUGAAACCCU-----GUC----UCUACUA 3' ||||||| |||||| |||||| ||| ||| |||| ||| ||:||| target 3':GUCAGUCC-UAAGCU-UGGUCGA---GGU-----CAC---GGGAUAAUCCAGGUUUAGGUGAG 5' |
-41.40 | 2 | RIC-seq |
| chr1:1792628:1792670:[-] | chr11:65202110:65202145:[+] | nonBSJ supported | Exon |
circRNA 5':CCCUGCCUU-AGCCUCCCACAAUAUUGGGAUUAUGGGCAUGAGC 3' |||:||:| || ||:|:| : || |||::|| target 3': GGAUGGGACUCU-------UUGUGAGUACGUAACACGUGUUCC 5' |
-20.00 | 1 | RIC-seq |
| chr1:1792696:1792726:[-] | chr11:65202107:65202139:[+] | nonBSJ supported | Exon |
circRNA 5':AUGAGGACUCUUUAUGU----UGCCCAGACUGGGC 3' ||||:| :|:|||: ||| ||: ||| target 3':GACUCUUUGUGAGUACGUAACACGUGUUC--CCCA 5' |
-18.50 | 1 | RIC-seq |
| chr1:1795374:1795434:[-] | chr11:65206891:65206949:[+] | nonBSJ supported | Exon |
circRNA 5': CUAUGUUGCC-CAAACUGGAUCCACCCGCCUUGGCCUUCCAAAAUUUUAGGAUUACAGGCGU 3' ||| |:: || || |||||||||:|||::| ||:||||| ||||||||:||| target 3':GGAU-CGGAGGAGUAUA--CUAGGUGGGUGGAGUCAGAGGGUUUCACGACCCUAAUGUUCGC 5' |
-65.50 | 1 | RIC-seq |
| chr1:1795392:1795434:[-] | chr11:65206908:65206949:[+] | nonBSJ supported | Exon |
circRNA 5': CUAUGUUGCC-CAAACUGGAUCCACCCGCCUUGGCCUUCCAAAA 3' ||| |:: || || |||||||||:|||::| ||:||||| target 3':GGAU-CGGAGGAGUAUA--CUAGGUGGGUGGAGUCAGAGGGUUUC 5' |
-47.00 | 1 | RIC-seq |
| chr1:1797404:1797451:[-] | chr11:65204726:65204771:[+] | nonBSJ supported | Exon |
circRNA 5':GAGCCAACGUU-GC-GC-CAUUGUACUCCAGCCUGGGCAACAAGAGUGAAA 3' |||| :| :| ||: ||||| |::| ||:|| :|| target 3': UCGGAAAAGUUUGAUGAGUGUUUU-AGGUC---CUUGGUAUUUUCUUUUA 5' |
-18.90 | 1 | RIC-seq |
| chr1:1797655:1797687:[-] | chr11:65191843:65191881:[+] | nonBSJ supported | Exon |
circRNA 5':CUGUUUUCUGGCU--GGGCGCAG--UGGCGCACG---CCU 3' ||||:| ::||| ||| | ||: ||| || target 3': ACAAGAUGUCGAAUCCCUAGAAGAACUUCGUUCCAAGGU 5' |
-16.50 | 1 | RIC-seq |
| chr1:1799584:1799599:[-] | chr11:65210873:65210888:[+] | nonBSJ supported | Exon |
circRNA 5':AUGAAGG-AACCUUUAG 3' ||||:: ||||:|:| target 3':AACUUUUAUUGGGAGU 5' |
-11.90 | 1 | RIC-seq |
| chr1:1799689:1799749:[-] | chr11:65207885:65207928:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGCUACGCGGGAG---GCUGAGGCAGGAGAAUUGCUCGAACCCGGGAG-GCAGAGGUUGCAGC 3' |||| | :| ||::|||| |||| |||| || :|||: target 3':UGUCGCAGAAUCAGACAGCGGUUCCGA-------------------CCUCACGUCACC-GCGUU 5' |
-34.50 | 2 | RIC-seq |
| chr1:1799996:1800055:[-] | chr11:65210260:65210327:[+] | nonBSJ supported | Exon |
circRNA 5': UAGAGACGGGGUUU-----CACCAUCUUGGCUAGGCUGG--UCUUGAACUCCUGACCUC--GUGAUUCA 3' ||| | ||:|| | | ||||||||| :||| :||: | ||||:| || ||||||| target 3':GGUC-CGACCUCACAUCACCGCGCUAGAACCGAG-UGACAUUGGAGGUGGAGGGCCCAAGUUCACUAAGA 5' |
-44.40 | 1 | RIC-seq |
| chr1:1800280:1800323:[-] | chr11:65194477:65194513:[+] | nonBSJ supported | Exon |
circRNA 5':AUAGAAAUUAACUUCAGAAGAUUUUUUGAGUUCUU--AGGCAAAUA 3' ||| |:| :||:||| ||: |||||||| target 3':AAUCAGUGAGU--GGUUUUC-------CUUUUUUUGUUCCGUUUAA 5' |
-14.40 | 2 | RIC-seq |
| chr1:1802156:1802208:[-] | chr11:65201313:65201349:[+] | nonBSJ supported | Exon |
circRNA 5':AGAGGUGGGGUUUCACCCUGUUGGUCAGGCUGGUCUUGAACUCCUGACCUCAG 3' ||||:|| : || |||| ||| || |||| || target 3':CCUCCGCCGU------------CCCCUCCGCCCACCACACC----CUGGUGUA 5' |
-27.90 | 1 | RIC-seq |
| chr1:1802864:1802891:[-] | chr11:65207898:65207924:[+] | nonBSJ supported | Exon |
circRNA 5':AGUCUCACUCUGUUGCCGUGGCUGGAGU 3' |||| |||||:|||: |||||||| target 3':GCAGAAUCAGACAGCGGUUCCGACCUC 5' |
-38.40 | 2 | RIC-seq |
| chr1:1807155:1807203:[-] | chr11:65208728:65208794:[+] | nonBSJ supported | Exon |
circRNA 5':UGUCUUC----CCAUU----CCCCUUGU----GGCCAGCCUU-----GUGAAAUGA-AGUCUCUGUU 3' || ||| |||:| | ||| ||||||||:: ||| |::| | :|||:|| target 3':UCAAAAGUCUUGGUGACUUCGAGGAUUUUCUUCCGGUCGGGGUCGACCACAAUGUUCUGGGAGGCAC 5' |
-34.30 | 1 | RIC-seq |
| chr1:1809773:1809791:[-] | chr11:65197658:65197679:[+] | nonBSJ supported | Exon |
circRNA 5':UGGGAGAGG-UACU-UGA-AGG 3' ||||||| :||| ||| || target 3':GUCCUCUCAAGUGACACUCUCG 5' |
-16.20 | 2 | RIC-seq |
| chr1:1810169:1810205:[-] | chr11:65209616:65209664:[+] | nonBSJ supported | Exon |
circRNA 5':AGGG---CAGC----GC-----CCAUAAAGGGGAAGA-GA-GGAGAGAUCU 3' ||| |||| || |||| ||||| || |||| ||:| target 3':ACCCCUGGUCGAGUCCGAGACCGGUAC--CCCCUACAACUACCUCACUGGU 5' |
-30.70 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:65206891:65206949:[+] | target | - | chr11:65206917-65206918 | A>G | LAML-KR | ICGC |
| chr11:65206908:65206949:[+] | target | - | chr11:65206917-65206918 | A>G | LAML-KR | ICGC |
| chr11:65208728:65208794:[+] | target | - | chr11:65208773-65208774 | A>C | PACA-CA | ICGC |