5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr14:101404208:101404269:[+] | chr11:65201279:65201324:[+] | nonBSJ supported | Exon |
circRNA 5':UUGCAAUCACAUUAAUGAGUAGACAAAUCAAGUGGAAGGGAAGCUGGUAGACAC-CAA---UCAUA 3' || |:||||| |||||||||| |:|||:| | || |||: target 3':CACCCUGGUGUA-----------------UUCACCUUCCAC---AUCAUUUUAGAGUCUGAAGUGA 5' |
-25.80 | 1 | RIC-seq |
| chr14:101404249:101404270:[+] | chr11:65201263:65201279:[+] | nonBSJ supported | Exon |
circRNA 5':AGCUGGUAGACACCAAUCAUAA 3' ||| ||||| || ||||| target 3':AUGA-CAUCU-UG---AGUAUA 5' |
-10.10 | 1 | RIC-seq |
| chr14:101405256:101405286:[+] | chr11:65190592:65190617:[+] | nonBSJ supported | Exon |
circRNA 5':ACUGUUAUCCUGAGUAAGGAGCAUAGAGACA 3' |||:: |||| ||:| |||| target 3':GGACGGAAGGAGGAAG-----GUGUGUCUGG 5' |
-19.30 | 1 | RIC-seq |
| chr14:101411673:101411740:[+] | chr11:65202995:65203061:[+] | nonBSJ supported | Exon |
circRNA 5':AGUC-CUGUUAGA--CAGCUCUUUAAUGAGGGAGGAAUGCAUGGAAAGGUGGAAGAUAAGUGGAA--UGAGAU 3' |:| ||| ||||||| : ||:| || ||||| ::| ||:| ||:: | ||||| target 3':ACGGAGACCCACGGAGUCGAGACGUGGGUCUC-CC-UACGU-UUUCUCUAGGGGCG--UCGUGUGAAACUCU 5' |
-37.80 | 1 | RIC-seq |
| chr14:101416052:101416076:[+] | chr11:65210125:65210147:[+] | nonBSJ supported | Exon |
circRNA 5':UAUUCUUAAGACUUCCCUAUUCAUA 3' |:||:| |||:|| ||:||: target 3':UUGAGGA--CUGGAGCACUAGGUGG 5' |
-14.70 | 1 | RIC-seq |
| chr14:101416052:101416080:[+] | chr11:65210120:65210147:[+] | nonBSJ supported | Exon |
circRNA 5':UAUUCUUAAGACUUCCCUAUUCAUA-GCUA 3' |:||:| |||:|| ||:||: ||: target 3':UUGAGGA--CUGGAGCACUAGGUGGACGGA 5' |
-18.20 | 1 | RIC-seq |
| chr14:101416170:101416195:[+] | chr11:65192942:65192968:[+] | nonBSJ supported | Exon |
circRNA 5':UGGACCUAUGAU-GAUGACUGGUG-GCG 3' || | :|| |||| |||:| || target 3':UCCCCGUCGCUUCCUAC-GACUAGACGA 5' |
-14.80 | 2 | RIC-seq |
| chr14:101416520:101416541:[+] | chr11:65201896:65201922:[+] | nonBSJ supported | Exon |
circRNA 5':UUGCUGCAGGAU-----GGCAUA-UACA 3' || |:|||||: :|||| ||| target 3':UAC-AUGUCCUGUGUUAUCGUAAAAUGG 5' |
-16.40 | 2 | RIC-seq |
| chr14:101417508:101417531:[+] | chr11:65198554:65198583:[+] | nonBSJ supported | Exon |
circRNA 5':UUGUAU-GAGUAGAUAAA-----AGAAACU 3' ||: ||:||| :||| |||||| target 3':CACGAACCUUAUCAGUUUGAGUGUCUUUGU 5' |
-10.80 | 2 | RIC-seq |
| chr14:101418791:101418833:[+] | chr11:65192922:65192966:[+] | nonBSJ supported | Exon |
circRNA 5':UGGUGGUCACAAGAUGU--AUA-GCUGCCUCUGUAUGUUUGGCGCA 3' ||::|: ||||: || ||||| ||:| ||:||:||| target 3':CCCGUCGCUUC-CUACGACUAGACGACGCAUACGUUCAGACUGCGG 5' |
-37.10 | 2 | RIC-seq |
| chr14:101419343:101419377:[+] | chr11:65193548:65193576:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGAACAAAGCUCAAGGACAUUUUUAGAAAUACG 3' |||||| |||| ||| ||||:||| :|| target 3':AGUCUUGGUUCG---UCCC--AAAAGUCUA-GUGU 5' |
-21.50 | 1 | RIC-seq |
| chr14:101425115:101425127:[+] | chr11:65191730:65191742:[+] | nonBSJ supported | Exon |
circRNA 5':CGGUUCAAGCAUG 3' || ||||||| target 3':ACCUUGUUCGUAA 5' |
-13.50 | 1 | RIC-seq |
| chr14:101425213:101425264:[+] | chr11:65190297:65190343:[+] | nonBSJ supported | Exon |
circRNA 5':ACCU--AGCCUAUUAUAUUACCUUGUCUAUUAUCUCUCUUGGAAAUGAACCCAU 3' ||| ||||: || | |:|:| :|||:|::: || ||||| target 3':GGGACUUCGGGACUC------GAUC-GGUGAAGGAGGGGGUGUUGAUGUGGGUC 5' |
-29.90 | 1 | RIC-seq |
| chr14:101425241:101425300:[+] | chr11:65190309:65190360:[+] | nonBSJ supported | Exon |
circRNA 5':UAUCUCUCUUGGAAAUGAACCCAUUGACAGAUAUUAAGACUAUUCAAGAAACUUGCUUAG 3' |||||||:: || ||| ||| || || ||| :|| ||: |::| target 3': UAGAGAGGGACAG-ACAGGGG--ACU-UCGGGAC-UC-GAUCGGUGAAG-GAGGGGGUG 5' |
-28.40 | 1 | RIC-seq |
| chr14:101425899:101425932:[+] | chr11:65209678:65209714:[+] | nonBSJ supported | Exon |
circRNA 5':UGAAUGG----GGUGAUGACU-UGAUGGUUGUUCGUUGU 3' |||::| :|:| ||| :|| ||:|||: |:|| target 3':UCUUGUCGUCGUCGC-ACUUCCGCU-CCGACAGUCGACU 5' |
-23.20 | 1 | RIC-seq |
| chr14:101425907:101425971:[+] | chr11:65209688:65209740:[+] | nonBSJ supported | Exon |
circRNA 5':GUGAUGACUUGAUGG-UUGUUCGUUGUUCCAUCUUAAAC-GUAUGUACAUGUUAAAUGAAGAAAAGG 3' || : ||:||| || :|||:| :|||| ||| |:| |:| |: ||||| ||| target 3':AAC-GGUGGACU-CCGGACAGG-----GGGUACUC-UUGUCGU-CGU---CGC---ACUUCCGCUCCG 5' |
-25.50 | 1 | RIC-seq |
| chr14:101426137:101426152:[+] | chr11:65201540:65201554:[+] | nonBSJ supported | Exon |
circRNA 5':AGAAUGGACAUCAUGA 3' |||| |:|||| target 3':ACUUAGAA-UGGUACC 5' |
-8.40 | 1 | RIC-seq |
| chr14:101426770:101426827:[+] | chr11:65192744:65192792:[+] | nonBSJ supported | Exon |
circRNA 5':CACACCCAGACCUAACUGAUUUCCAGG----UUGG-GGCUCUCCUAGAGAGUGCCUCUCUUGG 3' |||||| ||| || ||| || :||| |:|||| ||| || |:|| target 3': UGUGGGGAGGGAA--ACC-AAGAGCCUUUUGACCACUGAGA--------CAC--AGUGGACA 5' |
-32.50 | 1 | RIC-seq |
| chr14:101426777:101426829:[+] | chr11:65190295:65190332:[+] | nonBSJ supported | Exon |
circRNA 5':AGACCUAACUGAUUUCCAGGUUGGGGCUCUCCUAGAGAGUGCCUCUCUUGGUA 3' || ||| |: |:|||| ||:||:| :| |:| |:| ||: target 3':ACUCGAUCGG-UGAAGG----------AGGGGGUG-UUGAUGU-GGGU-CCG 5' |
-25.20 | 1 | RIC-seq |
| chr14:101426794:101426829:[+] | chr11:65190295:65190330:[+] | nonBSJ supported | Exon |
circRNA 5':AGGUUGGGG-----CUCUCCUAGAGAGUGCCUCUCUUGGUA 3' ||:|:| |||:||:| :| |:| |:| ||: target 3': UCGAUCGGUGAAGGAGGGGGUG-UUGAUGU-GGGU-CCG 5' |
-24.60 | 1 | RIC-seq |
| chr14:101427640:101427701:[+] | chr11:65207446:65207507:[+] | nonBSJ supported | Exon |
circRNA 5':AAUUCUCCUGCCUCUGCCUCCCG-AGUAGCUGGGAUCACAGGCGUGUGCCACCACGCCUGGCU 3' ||:|||||||||| |||||||: ||| |||||||: ||||||:|| ||||||||:||: | target 3':CUAGGAGGACGGAGUCGGAGGGUGUCA-CGACCCUGAUGUCCGUACUCGGUGGUGUGGGUAGU 5' |
-104.70 | 1 | RIC-seq |
| chr14:101427646:101427701:[+] | chr11:65207446:65207500:[+] | nonBSJ supported | Exon |
circRNA 5':CCUGCCUCUGCCUCCCG-AGUAGCUGGGAUCACAGGCGUGUGCCACCACGCCUGGCU 3' ||||||| |||||||: ||| |||||||: ||||||:|| ||||||||:||: | target 3': GACGGAGUCGGAGGGUGUCA-CGACCCUGAUGUCCGUACUCGGUGGUGUGGGUAGU 5' |
-93.10 | 1 | RIC-seq |
| chr14:101427868:101427894:[+] | chr11:65202192:65202219:[+] | nonBSJ supported | Exon |
circRNA 5':AGGGGAACAACAUGGCUCAAUGGAGAA 3' ||:| ||||| ||| ||||||||| target 3':ACCUCCCGUUGUCCCGUCUUACCUCUUU 5' |
-29.90 | 1 | RIC-seq |
| chr14:101428796:101428851:[+] | chr11:65198186:65198243:[+] | nonBSJ supported | Exon |
circRNA 5':AAGAUUGUGAUGUAUGUUCUU--GCUUUGAG---UCAGUGAUGAGUUCAAGUGGCCACUUA 3' || :||||| | ||| :|: |:|| ||| || :||| ||| ||||||: target 3':CUCAGACACUUCUCUCAAUAUUUUGGUAUUCACGAGUGACGGCUCC-GUUA--CGGUGAGG 5' |
-31.00 | 1 | RIC-seq |
| chr14:101429946:101430017:[+] | chr11:65191803:65191869:[+] | nonBSJ supported | Exon |
circRNA 5':CAGGGAUC----------AAGGUCACAUGCUACUUAUGAGAAUCUAAUGCCUG-AUGAUCUGAGGUAGAACAGUGAUCUGGAA 3' ||||||| ||||| || || || :| | ||||:| ||||: ||:| :|| target 3':AUCCCUAGAAGAACUUCGUUCCAAGGUUCG-UGUUU------------UGAUCAUACUGGCCUCCGA---GUUAAAUCUUCUA 5' |
-35.00 | 1 | RIC-seq |
| chr14:101430301:101430330:[+] | chr11:65207376:65207413:[+] | nonBSJ supported | Exon |
circRNA 5':GGUGGAG--GCUGUC------UGCAGUAGG---AGCAUGGA 3' |||||: ||| || | |||:| : |||| || target 3': UACCUUUACGAAAGGGUACUAGGUCGUGUAGAUCGU-CC 5' |
-19.30 | 1 | RIC-seq |
| chr14:101430420:101430461:[+] | chr11:65192373:65192430:[+] | nonBSJ supported | Exon |
circRNA 5':ACAGGGCCAAA-UGCA---CCCCA-----------GUAAUGAAGUUGGGAUUGAUGU 3' ||| ||||| |||| ||||| |:||:| :||||::| ||: target 3':GGUCACGGUUCGACGUAUGGGGGUAGGGGGUGUGACGUUGCGGGUGCCCUGGCCACGG 5' |
-41.30 | 2 | RIC-seq |
| chr14:101430724:101430765:[+] | chr11:65205896:65205943:[+] | nonBSJ supported | Exon |
circRNA 5':CAUGGUCAGAAGCCUUAUGGUUGC-C-ACAGG------GUAUUAGGAGCA 3' |||| || | |||||||| | ||| :||:||::||| target 3':UUACCUAUCACAGC--UACCAACGUGUUGUAUCGUUUAUAUGAUUUUCGG 5' |
-26.70 | 2 | RIC-seq |
| chr14:101431007:101431038:[+] | chr11:65198973:65199003:[+] | nonBSJ supported | Exon |
circRNA 5':AGUUUCUCCUUGG-GUUU-UGUGAAUAUAGG-GCU 3' |: || ||||| | :||:|| || || target 3':ACGU-GA-GAACCACUCUUGCAUUUUA--CCACGU 5' |
-15.00 | 1 | RIC-seq |
| chr14:101431013:101431053:[+] | chr11:65198970:65199018:[+] | nonBSJ supported | Exon |
circRNA 5':UCCUUGGG--UUUUGUGAAUAU------AGGGCUUUAAAAUUAU-UAGUG 3' |||:||: ::||||| ||::| |||||| :||| target 3':UGGAGCCUUGGGAACACGUGAGAACCACUCUUGC-AUUUUACCACGUCAA 5' |
-18.70 | 1 | RIC-seq |
| chr14:101431738:101431752:[+] | chr11:65207153:65207167:[+] | nonBSJ supported | Exon |
circRNA 5':UGAUCAAAGUU-CUUG 3' |||| ||||: ||| target 3':UUUAG-UUCAGUGAAA 5' |
-6.80 | 1 | RIC-seq |
| chr14:101433678:101433739:[+] | chr11:65209248:65209289:[+] | nonBSJ supported | Exon |
circRNA 5':AGCAUUAUAUUAAAGCUUUAAUAUAUUAAAUAAAAAUCUAAUAUUAAUAUAUAAUUAAUGCA 3' || |||| |||:|:| ||||||:|| |||| target 3': CGGAGAUCUUUUUCUC-AUUGUGUUG-----UUUUAGGUUCCG-------------UACGG 5' |
-11.20 | 1 | RIC-seq |
| chr14:101433690:101433741:[+] | chr11:65209255:65209308:[+] | nonBSJ supported | Exon |
circRNA 5':AAGCUUUAAUAUAUUAAAUAAAAAUCUAAUAUUAAU---AUAUAAUU-AAUGCAAU 3' |:|: |:|:|: |||| |:|:||: ||| ||| target 3': UUGGUC-UGUGUGUUACGCUCGGAGAUCUUUUUCUCAUUGUGUUGUUUUAGGUUC 5' |
-11.10 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:65190295:65190330:[+] | target | - | chr11:65190296-65190297 | C>T | PRAD-CA | ICGC |
| chr11:65190295:65190332:[+] | target | - | chr11:65190296-65190297 | C>T | PRAD-CA | ICGC |
| chr11:65192744:65192792:[+] | target | - | chr11:65192751-65192753 | AC>- | PACA-CA | ICGC |
| chr11:65192922:65192966:[+] | target | - | chr11:65192933-65192934 | T>C | PRAD-CA | ICGC |
| chr11:65207446:65207500:[+] | target | - | chr11:65207469-65207470 | T>C | LAML-KR | ICGC |
| chr11:65207446:65207507:[+] | target | - | chr11:65207469-65207470 | T>C | LAML-KR | ICGC |