Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chr16:11154763:11154838:[+]	chr11:65190637:65190702:[+]	nonBSJ supported	Exon	circRNA 5':UCCGGGUGUUCUUCAUG-CUGCGUUCCCUGUCACUGCAAUUGCGAGGGGAGCCUGAGACACAGUUGCCGCUGACUCG 3' \|\| \|\|: \|:: \|\| \|\|\|\| \|\|\|\| :\|\|\| \| \|\|\|\| \| \|\|\| \| \| \| :\|\| \| \|\|\|\|\|\|\| target 3':GGG---ACGUGGGUGACGGACGGAAGGACUAGUAAA------GGUCCCGAC-GACGCCG-GAUAAGGAGGACUGAGG 5'	-47.20	1	RIC-seq
chr16:11154797:11154840:[+]	chr11:65190654:65190699:[+]	nonBSJ supported	Exon	circRNA 5': GCA---AUUGCGAGGGGAGCCUGAGACA---CAGUUGCCGCUGACUCGGG 3' \|\|\| \|:\|\|\| \| \|\|\|\|\| \|\|\| \|\| \|\|\|\| \|\|\| target 3':ACGUGGGUGACGGACGGAA-GGACUAGUAAAGGUCC-CGACGAC---GCCG 5'	-28.60	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr16:11154763:11154838:[+]	circRNA	-	chr16:11154770-11154771	G>A	LICA-CN\|LAML-KR	ICGC