5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr9:113735789:113735840:[-] | chr11:65195969:65196016:[+] | nonBSJ supported | Exon |
circRNA 5':AGGUGGACGUCUGAUUUAUGAAGCUCCC-CAUC-CACCUAUCUGAGUACCUGAC 3' |||| || ||:||| ||| ||: |||| |||||||| || target 3':CCCACAGA-AGUA-AAGUAC-----GGGCGUGACGUGGUAUUACUCAUGGUGUGU 5' |
-33.40 | 1 | RIC-seq |
| chr9:113737939:113737958:[-] | chr11:65194975:65194996:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUACUCUGCA-GGUCAUCU 3' | :|| |||||:| target 3':ACAUGUGCACCUCCCCAGUGGU 5' |
-11.10 | 1 | RIC-seq |
| chr9:113741290:113741314:[-] | chr11:65202324:65202347:[+] | nonBSJ supported | Exon |
circRNA 5':AGUCACUGUCCUACACGAUGGAUCU 3' |||||||: |||| |||:|||| target 3':CCAGUGACGU-AUGUACUAUCUAGU 5' |
-26.90 | 2 | RIC-seq |
| chr9:113746831:113746884:[-] | chr11:65199611:65199662:[+] | nonBSJ supported | Exon |
circRNA 5':AAUCUCACUGCUAAGUAUAUACCCAAAAGAAAGAAAAUCAGCAUAUUGAAGAGG 3' |||:||||:|| |||| |||||||| || || |||||| |||:|:||:|| target 3': UAGGGUGAUGACCCAUAGAUGGGUUUCCUCUCAUUUAGUAAUAUGAUUUUUC 5' |
-48.60 | 1 | RIC-seq |
| chr9:113747565:113747594:[-] | chr11:65196556:65196585:[+] | nonBSJ supported | Exon |
circRNA 5':UGUAUCCUGUGAGUACACUGAAGCAAGAUC 3' |||:|||||: |: || ||||:|||||| target 3':UUAUGGGACAUACGGGUAACUUUGUUCUAA 5' |
-30.40 | 2 | RIC-seq |
| chr9:113751445:113751476:[-] | chr11:65194495:65194527:[+] | nonBSJ supported | Exon |
circRNA 5':CAAGCUCAGAAAAUGUUUA--UCAUU--CCAAGAGA 3' ||||:|||| :|||| |||:| ||||:|| target 3':CUUCGGGUCU---GCAAAAUCAGUGAGUGGUUUUCC 5' |
-25.10 | 1 | RIC-seq |
| chr9:113751595:113751631:[-] | chr11:65211817:65211842:[+] | nonBSJ supported | Exon |
circRNA 5':AGAGUUCUGCAGCAGUGGCAUGUGCCUGUAUUCCCAG 3' ||: |||| ||||| || |||: |||| target 3':ACUU-AGAC-UCGUCUUAGU---CGGG-----GGGU 5' |
-24.00 | 2 | RIC-seq |
| chr9:113754635:113754674:[-] | chr11:65211631:65211669:[+] | nonBSJ supported | Exon |
circRNA 5': AGUGUGUGAGAGUUGCAGCU-UCUUUAAAUCCUCACUGACA 3' |:||||| | |: ||:|| :|||| :|||| |: || target 3':CUUACACAACC-CG--GUUGACGGAAACGGGGGAGGGGGUGA 5' |
-27.00 | 2 | RIC-seq |
| chr9:113758773:113758820:[-] | chr11:65212289:65212324:[+] | nonBSJ supported | Exon |
circRNA 5': CAGCCACUG--AGUCUGGUUGUUUCUUCUUCUCCCAGAUUUUUUAGGGAA 3' |||||||:| || ||| :||:||||:| ||||| target 3':AGUCGGUGGCAGUC-GACACCUAAGGAAGGA---------------CCCUUG 5' |
-33.50 | 2 | RIC-seq |
| chr9:113759143:113759181:[-] | chr11:65197739:65197771:[+] | nonBSJ supported | Exon |
circRNA 5':UGUAACGAGACCAUCAGACCCCAGAAGGG-GAAGGGUCCU 3' |:| | || ||| |||| :||||| || |||:|| target 3':CCGUCGGUC-GGU-GUCU-----UUUCCCUCUCCCCGGGU 5' |
-34.20 | 1 | RIC-seq |
| chr9:113760418:113760440:[-] | chr11:65208462:65208488:[+] | nonBSJ supported | Exon |
circRNA 5':UGGACAGUUUAGUGAGU-----GGUUCU 3' |:|||| | ::||| ||:|| target 3':CCUUGUCUU-UGGUUCAAAAACCCGAGU 5' |
-14.70 | 1 | RIC-seq |
| chr9:113760957:113760989:[-] | chr11:65207234:65207261:[+] | nonBSJ supported | Exon |
circRNA 5':UGGGCGACACCCUCCAAAAUUCAGAUUCAGAUG 3' ||| |||||||:|| | |||:: :|| target 3':UCCC-CUGUGGGGGGGGU----UCUGGAAUUAG 5' |
-28.10 | 2 | RIC-seq |
| chr9:113761171:113761182:[-] | chr11:65196173:65196186:[+] | nonBSJ supported | Exon |
circRNA 5': CCUUC-UUUUGAA 3' ||||| :|: || target 3':CGGAAGUGAGUCUC 5' |
-7.00 | 2 | RIC-seq |
| chr9:113761358:113761441:[-] | chr11:65191861:65191905:[+] | nonBSJ supported | Exon |
circRNA 5':GGAGUUGGGGCUGACAUCAUCUUUAUUCAGAAGUCACUUUAUGACCAUGUGCGGGAUAUAUUAAUUUCACUACAGCUUUU-GAUC 3' | |||| ||| |||| |:|| :::|| ||||||||| |||| target 3':ACGCAACACCG----UAGU---------------------------UGCAA-UUUUACAA---------GAUGUCGAAUCCCUAGA 5' |
-21.80 | 1 | RIC-seq |
| chr9:113768541:113768583:[-] | chr11:65207039:65207068:[+] | nonBSJ supported | Exon |
circRNA 5':GCUCUUGCAUCAUCAGGAUUUUCAGUGACUUGAGAAAGCUGGG 3' ||| ||| :||||: |:|||| ||||||| target 3':GGAGCACG------------GAGUCGGAGGACUC-UUCGACCA 5' |
-32.80 | 2 | RIC-seq |
| chr9:113770321:113770336:[-] | chr11:65207806:65207824:[+] | nonBSJ supported | Exon |
circRNA 5': GAUUACAGGUGC---CCAC 3' ||:||||||::| ||| target 3':CCUGAUGUCCGUGUACGGU 5' |
-19.00 | 1 | RIC-seq |
| chr9:113770339:113770356:[-] | chr11:65191050:65191065:[+] | nonBSJ supported | Exon |
circRNA 5':UUAGCCUACCGAGUAGCU 3' ||:| |||||:||| target 3': GUUGUG-GGCUCGUCGC 5' |
-18.90 | 2 | RIC-seq |
| chr9:113770577:113770596:[-] | chr11:65207806:65207822:[+] | nonBSJ supported | Exon |
circRNA 5':UUUACAUGUUUUUGUGCUAG 3' ||||| |: ::|||:| target 3':UGAUGUCCGU--GUACGGU 5' |
-9.80 | 1 | RIC-seq |
| chr9:113772575:113772592:[-] | chr11:65211305:65211320:[+] | nonBSJ supported | Exon |
circRNA 5': CCAGGAACAGCCACUGUU 3' |||||| :||||||: target 3':AGGUCCU---UGGUGACGU 5' |
-22.80 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:65199611:65199662:[+] | target | - | chr11:65199613-65199614 | T>C | PACA-CA | ICGC |
| chr11:65199611:65199662:[+] | target | - | chr11:65199636-65199637 | C>T | RECA-EU | ICGC |
| chr11:65207234:65207261:[+] | target | - | chr11:65207246-65207247 | G>- | PACA-CA | ICGC |
| chr9:113760957:113760989:[-] | circRNA | - | chr9:113760968-113760969 | G>T | RECA-EU | ICGC |