Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chr20:21309230:21309244:[+]	chr11:65197781:65197795:[+]	nonBSJ supported	Exon	circRNA 5':AGGAGGUUCAGGGCA 3' \|:\|\|\|\|:\|\|\| \|\| target 3':CUUUCCAGGUCGCGG 5'	-19.50	1	RIC-seq
chr20:21314707:21314744:[+]	chr11:65200398:65200435:[+]	nonBSJ supported	Exon	circRNA 5':CACUUACAGGGUUACCUUA-CAGAAAGUG-GUUAUGUCAA 3' \|\|\| \|\|\|\|: \|\|:\| \| \|\| \|\| \| \|\|\| target 3':UUGA--GUCCUUACCUUUUGGUUUAUGACACACAAGAGUG 5'	-12.50	1	RIC-seq
chr20:21314778:21314818:[+]	chr11:65200433:65200469:[+]	nonBSJ supported	Exon	circRNA 5':UGGUGAAGUU-GAGGAUAGCAUUUUUAAAAAGAGAAAGGAUG 3' \|:\|\| \|\|:\| \|\|\|\|\|\|\| \|\|\|:\| \|\|\| \|\|\| :\|: target 3':CCUACCUCGACCUCCUAUAAUAAGA----UUCACUUCGUUG 5'	-21.40	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr11:65200398:65200435:[+]	target	-	chr11:65200428-65200429	C>A	PACA-CA	ICGC