Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr11:103178490:103178525:[+] chr11:65190941:65190971:[+] nonBSJ supported Exon

circRNA 5':GGCUCACUGCAGAAGUUCAUCCCA-ACUUUACUCCUA 3'


            |||| || |||| :||:||| ||:|: | ||:|


target  3': UGAG-GA-GUCU---GGUGGGGAGUGGAG-GCGGGUC 5'

 -26.50 22 RIC-seq
chr11:103178491:103178525:[+] chr11:65190941:65190970:[+] nonBSJ supported Exon

circRNA 5':GCUCACUGCAGAAGUUCAUCCCA-ACUUUACUCCUA 3'


            ||| || |||| :||:||| ||:|: | ||:|


target  3': GAG-GA-GUCU---GGUGGGGAGUGGAG-GCGGGUC 5'

 -24.30 8 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr11:103178490:103178525:[+] circRNA 2756208 chr11:103178512-103178513 CAA>C Jeune_thoracic_dystrophy ClinVar
chr11:103178491:103178525:[+] circRNA 2756208 chr11:103178512-103178513 CAA>C Jeune_thoracic_dystrophy ClinVar