5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr10:103558653:103558690:[-] | chr11:65208168:65208212:[+] | nonBSJ supported | Exon |
circRNA 5': CCAAAGGAGCACAGAUGUUACGGGAAUUU-------CAA-UGGCUU 3' || ||| ||| ||: |||:|| |::: || ||||| target 3':AGGGUUCAUCGACCCUG--AUGUCCGUGGGUGGUGGUGUGGACCGAU 5' |
-21.20 | 1 | RIC-seq |
| chr10:103559997:103560041:[-] | chr11:65195257:65195296:[+] | nonBSJ supported | Exon |
circRNA 5':ACAGAAUGGUUGCAAGAGUUUGGUGUGCCUCAUCAAUACAGCAGU 3' ||| ||| |||||||||| |||: |||| || |:||| target 3':GGUCCCACCUUCGUUCUCAAA--ACAUU-AGUAUUUU--UUGUCC 5' |
-30.10 | 1 | RIC-seq |
| chr10:103560020:103560041:[-] | chr11:65195275:65195296:[+] | nonBSJ supported | Exon |
circRNA 5':ACAGAAUGGUUGCAAGAGUUUG 3' ||| ||| |||||||||| target 3':GGUCCCACCUUCGUUCUCAAAA 5' |
-23.70 | 1 | RIC-seq |
| chr10:103565802:103565870:[-] | chr11:65209847:65209920:[+] | nonBSJ supported | Exon |
circRNA 5':UGUCU--CAGU----CUCCAUA-UUUAAGGACUGUGGGUGAAA-------AGCUUCUACCUGGAAUUGAAGUGCUUUGGA-CAG 3' |:|| |||: |||| ||: :||| | |::|| ||||||| |||: : |||:|| ||| target 3':UCGGACCGUCGAAACGAGGACGGAAGCGUCUGUC-CUUACGACAGGAAGGUCGAAGA-GGAU---------GGGAAGCCCAGUCU 5' |
-39.90 | 3 | RIC-seq |
| chr10:103565805:103565870:[-] | chr11:65209852:65209920:[+] | nonBSJ supported | Exon |
circRNA 5':UGUCU--CAGU----CUCCAUA-UUUAAGGACUGUGGGUGAAA-------AGCUUCUACCUGGAAUUGAAGUGCUUUGGA 3' |:|| |||: |||| ||: :||| | |::|| ||||||| |||: : |||:|| target 3':UCGGACCGUCGAAACGAGGACGGAAGCGUCUGUC-CUUACGACAGGAAGGUCGAAGA-GGAU---------GGGAAGCCC 5' |
-39.40 | 1 | RIC-seq |