5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr3:197598210:197598245:[+] | chr11:65200247:65200286:[+] | nonBSJ supported | Exon |
circRNA 5': GUUGAA---AGUGU-CUCUAC-CUUGUGAUCUCGGAGCAGC 3' |||| |:||| | |||| | ||||: ||| |||| target 3':AUAACCCAUGUUACAUGUGAUGAGUCCACUG--GCCACGUCA 5' |
-24.80 | 2 | RIC-seq |
| chr3:197599381:197599408:[+] | chr11:65205190:65205215:[+] | nonBSJ supported | Exon |
circRNA 5':CCUAUGA-GCCCAGG-AGUUUGAGACCAGC 3' ||| || ||| ||| || ||||||: target 3': GAU-CUACGGCUCCAUCUG--UCUGGUUC 5' |
-20.80 | 1 | RIC-seq |
| chr3:197599972:197600029:[+] | chr11:65192771:65192805:[+] | nonBSJ supported | Exon |
circRNA 5':AGGAUGGCAGUCCACAAAAGAACAGGCUUUGGGUUGACACACCCCUCCUCU--GUUUUCC 3' |||||||| ||||||||||||: |||:|| target 3':CUCUACCGUAG-------------------------UGUGUGGGGAGGGAAACCAAGAGC 5' |
-41.70 | 2 | RIC-seq |
| chr3:197602475:197602496:[+] | chr11:65208902:65208923:[+] | nonBSJ supported | Exon |
circRNA 5': GGCUUGCGCCACUGCACUCCAG 3' ||||::|:|| :||| target 3':ACCGAGUGUGGACAUUA-GGGUU 5' |
-20.40 | 1 | RIC-seq |