Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr11:85692977:85692991:[-] chr11:65196087:65196101:[+] nonBSJ supported Exon

circRNA 5':CCUUCCUGUUGCCAA 3'


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target  3':AGAAGGACAACGGUA 5'

 -24.60 2 RIC-seq
chr11:85692978:85693014:[-] chr11:65197516:65197542:[+] nonBSJ supported Exon

circRNA 5':ACAGUGGCCUCUCAGAACCAGAACCUUCCUGUUGCCA 3'


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target  3':AGUC-CUA---AG-CUUGGUC----GAGGUC-ACGGG 5'

 -21.40 2 RIC-seq
chr11:85694972:85694993:[-] chr11:65191754:65191791:[+] nonBSJ supported Exon

circRNA 5':CAGCCAC-ACCCU---------------UCAGCUGGCC 3'


            |:|| ||||: :| ||||||


target  3':UUUGGAAAUGGGGUCCUUUCCUCCCCACGGACGACCGU 5'

 -19.30 2 RIC-seq