5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr12:78392165:78392192:[+] | chr11:65196781:65196804:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGGGA-GCCUCUAAUUUAAAUAG-GAGA 3' |||| ||||| :|| |||| target 3':AGUCCAAACGGAGUG-------GUCACUCUU 5' |
-19.20 | 1 | RIC-seq |
| chr12:78392165:78392193:[+] | chr11:65196780:65196804:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGGGA-GCCUCUAAUUUAAAUAG-GAGAA 3' |||| ||||| :|| ||||| target 3':AGUCCAAACGGAGUG-------GUCACUCUUG 5' |
-20.10 | 1 | RIC-seq |
| chr12:78400225:78400252:[+] | chr11:65205060:65205090:[+] | nonBSJ supported | Exon |
circRNA 5':UCAGGUGUAAAU--GGU-AACGUGCAGCCUC 3' |||| ||| |||:|||||||| target 3':UGUCCCUUCCAAUUCCAUUUGUACGUCGGAC 5' |
-28.00 | 4 | RIC-seq |
| chr12:78400419:78400458:[+] | chr11:65192329:65192360:[+] | nonBSJ supported | Exon |
circRNA 5':GCCACCUGUCUCAGAAGGGGUCAAAACUGCUCCCUCAGGA 3' | ||:|||:| :|| |||| |: ||||||| target 3':AGAGGGGCAGGG--------GGUGUUGAGGGUGGAGUCCC 5' |
-33.70 | 2 | RIC-seq |
| chr12:78400823:78400849:[+] | chr11:65210799:65210828:[+] | nonBSJ supported | Exon |
circRNA 5':UUGCAAGCU--UGAUC-CCUAAGGG-CAGCA 3' |||| || | ||| :|| | || target 3':CACGUGUACACACGUGUGGAAAUCCAGACG 5' |
-14.10 | 1 | RIC-seq |
| chr12:78401174:78401222:[+] | chr11:65191550:65191598:[+] | nonBSJ supported | Exon |
circRNA 5':AGCAGCAACAU-----AGCCACCCGAAUACCGCGA-CAGUGGCACCAUUCAUUUA 3' |||| ||||| |:| || || | ||| ||||| |: target 3': UGUC-UUGUAACCUCUUGAA-GGAGGA-GGAUUCGGAGACCUU--UAAGUUAGA 5' |
-14.80 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr12:78392165:78392192:[+] | circRNA | - | chr12:78392170-78392171 | G>A | EOPC-DE | ICGC |
| chr12:78392165:78392193:[+] | circRNA | - | chr12:78392170-78392171 | G>A | EOPC-DE | ICGC |