5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr9:113735789:113735840:[-] | chr11:65195969:65196016:[+] | nonBSJ supported | Exon |
circRNA 5':AGGUGGACGUCUGAUUUAUGAAGCUCCC-CAUC-CACCUAUCUGAGUACCUGAC 3' |||| || ||:||| ||| ||: |||| |||||||| || target 3':CCCACAGA-AGUA-AAGUAC-----GGGCGUGACGUGGUAUUACUCAUGGUGUGU 5' |
-33.40 | 1 | RIC-seq |
| chr9:113737939:113737958:[-] | chr11:65194975:65194996:[+] | nonBSJ supported | Exon |
circRNA 5': GGUUACUCUGCA-GGUCAUCU 3' | :|| |||||:| target 3':ACAUGUGCACCUCCCCAGUGGU 5' |
-11.10 | 1 | RIC-seq |
| chr9:113741290:113741314:[-] | chr11:65202324:65202347:[+] | nonBSJ supported | Exon |
circRNA 5':AGUCACUGUCCUACACGAUGGAUCU 3' |||||||: |||| |||:|||| target 3':CCAGUGACGU-AUGUACUAUCUAGU 5' |
-26.90 | 2 | RIC-seq |
| chr9:113746831:113746884:[-] | chr11:65199611:65199662:[+] | nonBSJ supported | Exon |
circRNA 5':AAUCUCACUGCUAAGUAUAUACCCAAAAGAAAGAAAAUCAGCAUAUUGAAGAGG 3' |||:||||:|| |||| |||||||| || || |||||| |||:|:||:|| target 3': UAGGGUGAUGACCCAUAGAUGGGUUUCCUCUCAUUUAGUAAUAUGAUUUUUC 5' |
-48.60 | 1 | RIC-seq |
| chr9:113747565:113747594:[-] | chr11:65196556:65196585:[+] | nonBSJ supported | Exon |
circRNA 5':UGUAUCCUGUGAGUACACUGAAGCAAGAUC 3' |||:|||||: |: || ||||:|||||| target 3':UUAUGGGACAUACGGGUAACUUUGUUCUAA 5' |
-30.40 | 2 | RIC-seq |
| chr9:113751445:113751476:[-] | chr11:65194495:65194527:[+] | nonBSJ supported | Exon |
circRNA 5':CAAGCUCAGAAAAUGUUUA--UCAUU--CCAAGAGA 3' ||||:|||| :|||| |||:| ||||:|| target 3':CUUCGGGUCU---GCAAAAUCAGUGAGUGGUUUUCC 5' |
-25.10 | 1 | RIC-seq |
| chr9:113751595:113751631:[-] | chr11:65211817:65211842:[+] | nonBSJ supported | Exon |
circRNA 5':AGAGUUCUGCAGCAGUGGCAUGUGCCUGUAUUCCCAG 3' ||: |||| ||||| || |||: |||| target 3':ACUU-AGAC-UCGUCUUAGU---CGGG-----GGGU 5' |
-24.00 | 2 | RIC-seq |
| chr9:113754635:113754674:[-] | chr11:65211631:65211669:[+] | nonBSJ supported | Exon |
circRNA 5': AGUGUGUGAGAGUUGCAGCU-UCUUUAAAUCCUCACUGACA 3' |:||||| | |: ||:|| :|||| :|||| |: || target 3':CUUACACAACC-CG--GUUGACGGAAACGGGGGAGGGGGUGA 5' |
-27.00 | 2 | RIC-seq |
| chr9:113758773:113758820:[-] | chr11:65212289:65212324:[+] | nonBSJ supported | Exon |
circRNA 5': CAGCCACUG--AGUCUGGUUGUUUCUUCUUCUCCCAGAUUUUUUAGGGAA 3' |||||||:| || ||| :||:||||:| ||||| target 3':AGUCGGUGGCAGUC-GACACCUAAGGAAGGA---------------CCCUUG 5' |
-33.50 | 2 | RIC-seq |
| chr9:113759143:113759181:[-] | chr11:65197739:65197771:[+] | nonBSJ supported | Exon |
circRNA 5':UGUAACGAGACCAUCAGACCCCAGAAGGG-GAAGGGUCCU 3' |:| | || ||| |||| :||||| || |||:|| target 3':CCGUCGGUC-GGU-GUCU-----UUUCCCUCUCCCCGGGU 5' |
-34.20 | 1 | RIC-seq |
| chr9:113760418:113760440:[-] | chr11:65208462:65208488:[+] | nonBSJ supported | Exon |
circRNA 5':UGGACAGUUUAGUGAGU-----GGUUCU 3' |:|||| | ::||| ||:|| target 3':CCUUGUCUU-UGGUUCAAAAACCCGAGU 5' |
-14.70 | 1 | RIC-seq |
| chr9:113760957:113760989:[-] | chr11:65207234:65207261:[+] | nonBSJ supported | Exon |
circRNA 5':UGGGCGACACCCUCCAAAAUUCAGAUUCAGAUG 3' ||| |||||||:|| | |||:: :|| target 3':UCCC-CUGUGGGGGGGGU----UCUGGAAUUAG 5' |
-28.10 | 2 | RIC-seq |
| chr9:113761171:113761182:[-] | chr11:65196173:65196186:[+] | nonBSJ supported | Exon |
circRNA 5': CCUUC-UUUUGAA 3' ||||| :|: || target 3':CGGAAGUGAGUCUC 5' |
-7.00 | 2 | RIC-seq |
| chr9:113761358:113761441:[-] | chr11:65191861:65191905:[+] | nonBSJ supported | Exon |
circRNA 5':GGAGUUGGGGCUGACAUCAUCUUUAUUCAGAAGUCACUUUAUGACCAUGUGCGGGAUAUAUUAAUUUCACUACAGCUUUU-GAUC 3' | |||| ||| |||| |:|| :::|| ||||||||| |||| target 3':ACGCAACACCG----UAGU---------------------------UGCAA-UUUUACAA---------GAUGUCGAAUCCCUAGA 5' |
-21.80 | 1 | RIC-seq |
| chr9:113768541:113768583:[-] | chr11:65207039:65207068:[+] | nonBSJ supported | Exon |
circRNA 5':GCUCUUGCAUCAUCAGGAUUUUCAGUGACUUGAGAAAGCUGGG 3' ||| ||| :||||: |:|||| ||||||| target 3':GGAGCACG------------GAGUCGGAGGACUC-UUCGACCA 5' |
-32.80 | 2 | RIC-seq |
| chr9:113770321:113770336:[-] | chr11:65207806:65207824:[+] | nonBSJ supported | Exon |
circRNA 5': GAUUACAGGUGC---CCAC 3' ||:||||||::| ||| target 3':CCUGAUGUCCGUGUACGGU 5' |
-19.00 | 1 | RIC-seq |
| chr9:113770339:113770356:[-] | chr11:65191050:65191065:[+] | nonBSJ supported | Exon |
circRNA 5':UUAGCCUACCGAGUAGCU 3' ||:| |||||:||| target 3': GUUGUG-GGCUCGUCGC 5' |
-18.90 | 2 | RIC-seq |
| chr9:113770577:113770596:[-] | chr11:65207806:65207822:[+] | nonBSJ supported | Exon |
circRNA 5':UUUACAUGUUUUUGUGCUAG 3' ||||| |: ::|||:| target 3':UGAUGUCCGU--GUACGGU 5' |
-9.80 | 1 | RIC-seq |
| chr9:113772575:113772592:[-] | chr11:65211305:65211320:[+] | nonBSJ supported | Exon |
circRNA 5': CCAGGAACAGCCACUGUU 3' |||||| :||||||: target 3':AGGUCCU---UGGUGACGU 5' |
-22.80 | 2 | RIC-seq |
| chr9:113774257:113774283:[-] | chr11:65207455:65207482:[+] | nonBSJ supported | Exon |
circRNA 5': UGUUGGAAUAACAGGCAUGAGCCAUUG 3' ||:||| |: ||||||||||||||:: target 3':CACGACCCUGAUGUCCGUACUCGGUGGU 5' |
-38.70 | 2 | RIC-seq |
| chr9:113774495:113774555:[-] | chr11:65192629:65192693:[+] | nonBSJ supported | Exon |
circRNA 5': UUUUUGUUUGUUUGUUUGUUUGUUUGAGAC-AGGGUUUU--GCUCUAUUGUCCAGGCUG-GAGUG 3' |||||||||||| ||||||:|||||| |::|||:| || || ||| || :||: target 3':UAAAAACAAACAAUCAAACAGACAAACGUGAAUUUCAAGAUUCGUGA-AACCUUUCAAAGAUUCGU 5' |
-39.50 | 2 | RIC-seq |
| chr9:113775008:113775034:[-] | chr11:65212764:65212784:[+] | nonBSJ supported | Exon |
circRNA 5':ACCAACCUCAAAGGAUCAAGUGUGAAU 3' || ||: ||||| |::|||| target 3':AGGACGGG--UUCCU----CGUACUUC 5' |
-14.70 | 2 | RIC-seq |
| chr9:113775042:113775064:[-] | chr11:65201111:65201131:[+] | nonBSJ supported | Exon |
circRNA 5':CUCAAUUGAACAGUUUCUUAGUU 3' |||| | ||||| |||||: target 3':UAGUUU-C-UGUCAUA-AAUCAGU 5' |
-10.40 | 2 | RIC-seq |
| chr9:113775042:113775075:[-] | chr11:65201111:65201142:[+] | nonBSJ supported | Exon |
circRNA 5': GGCAUAUUUCUCUCAAUUGAACAGUUUCUUAGUU 3' || |:| |||| | ||||| |||||: target 3':ACCUUGUUUUUU-AGUUU-C-UGUCAUA-AAUCAGU 5' |
-12.30 | 2 | RIC-seq |
| chr9:113776838:113776859:[-] | chr11:65195102:65195128:[+] | nonBSJ supported | Exon |
circRNA 5': GGGCAGACA------CCUGGUCAUUCUA 3' |:||||| ||||| ||||| target 3':GUUCGUCUUUCUCCUGGGACC--UAAGAC 5' |
-17.80 | 1 | RIC-seq |
| chr9:113776843:113776864:[-] | chr11:65195082:65195103:[+] | nonBSJ supported | Exon |
circRNA 5':GGC-CAGGGCAGACACCUGGUCA 3' || || :|||| ||: :|| target 3':ACGUGUGUCGUCAC-GGGGUAGA 5' |
-21.50 | 1 | RIC-seq |
| chr9:113777471:113777494:[-] | chr11:65205323:65205352:[+] | nonBSJ supported | Exon |
circRNA 5':UGAAGUCCCAC-GGACUGGG------UGGCU 3' |||| |||| |:|||||: :||| target 3':GUUUCU-GGUGACUUGACCUGUGACAGCCGC 5' |
-23.30 | 2 | RIC-seq |
| chr9:113780152:113780183:[-] | chr11:65191053:65191096:[+] | nonBSJ supported | Exon |
circRNA 5': GGGACUACAGGCA--GG-CA-------CCACC-AUGCCC-AGUU 3' ||:| |:|| || || || || |::||| ||: target 3':ACCUUUUAUUUCGCAACCAGUUACAACAGG-GGUUGUGGGCUCGU 5' |
-21.20 | 1 | RIC-seq |
| chr9:113782069:113782127:[-] | chr11:65208258:65208315:[+] | nonBSJ supported | Exon |
circRNA 5':UUUGAGACGGAGUCUCACUCUGUCGCCCAGGCUGAUGUGCUGUGGCGUGAUCUUGGCUC 3' ||||||||||:||| |||||||:||||||||| |||| :||| |:| |||::||| target 3': AACUCUGCCUUAGAACGAGACAGUGGGUCCGACCUCACGUUACCACGCCAGAGUCGAC 5' |
-89.20 | 1 | RIC-seq |
| chr9:113783482:113783508:[-] | chr11:65198268:65198289:[+] | nonBSJ supported | Exon |
circRNA 5':AGUAUCGUCACCAUGCUGUACGUUAGA 3' |||||:| ||:|| :||: :|| target 3':CUAUAGUA----UAUGA-GUGUUGUCC 5' |
-12.70 | 2 | RIC-seq |
| chr9:113785585:113785648:[-] | chr11:65201681:65201740:[+] | nonBSJ supported | Exon |
circRNA 5':UAACUCUGUG-AAGGACUGAGCAGGGGUGUGUGCGUGGGA---UUGCAGAGUCAUGGAAGAAAUAGUA 3' ||||||||| ||||| :|:|| : ::|:|: :|:||: | ||: | |||||:||| target 3': UUGAGACACAUUCCUCUUUUGU------GGGUGUAUAGUGAAGAUGUUCCUGUGAC-UCUUUGUCAC 5' |
-40.00 | 1 | RIC-seq |
| chr9:113785594:113785648:[-] | chr11:65201690:65201740:[+] | nonBSJ supported | Exon |
circRNA 5':UAACUCUGUG-AAGGACUGAGCAGGGGUGUGUGCGUGGGA---UUGCAGAGUCAUGGAA 3' ||||||||| ||||| :|:|| : ::|:|: :|:||: | ||: || target 3': UUGAGACACAUUCCUCUUUUGU------GGGUGUAUAGUGAAGAUGUUCCUGUGACU 5' |
-30.80 | 1 | RIC-seq |
| chr9:113787063:113787111:[-] | chr11:65200396:65200439:[+] | nonBSJ supported | Exon |
circRNA 5':CAGCAAACUAACACAAGAACAGAAAACCUAACACUGCAUGUUCUCACUC 3' ||| |||| || ||| ||||||| || |||| |||||||||| target 3':UUCG-UUGA----GUCCUUACCUUUUGGUUUAUGACACACAAGAGUGAA 5' |
-35.30 | 1 | RIC-seq |
| chr9:113788802:113788840:[-] | chr11:65202855:65202881:[+] | nonBSJ supported | Exon |
circRNA 5':AGUAUUGAAAGUUCUGGCC-AGGGCAAUCAGGCAAGAGAU 3' ||| ||| |||:: ||||| ||||| target 3':ACAU-ACU---AAGGUAAAAUCCCG---------UCUCUU 5' |
-16.60 | 2 | RIC-seq |
| chr9:113790600:113790658:[-] | chr11:65207422:65207468:[+] | nonBSJ supported | Exon |
circRNA 5':AGGCAUG-GUGGCUCAUGCUGGAAAUCCCAUCACUUUGGGAGGCCAAGGUGGGCAGAUCA 3' |||||| |: :| ||:: ||||||| :|::| ||::|| ||| target 3': CCGUACUCGGUG-GUGU--------GGGUAGUAUUUAAUUUUGAAG--ACUUGU-UAGA 5' |
-34.30 | 1 | RIC-seq |
| chr9:113790600:113790659:[-] | chr11:65207422:65207469:[+] | nonBSJ supported | Exon |
circRNA 5':UAGGCAUG-GUGGCUCAUGCUGGAAAUCCCAUCACUUUGGGAGGCCAAGGUGGGCAGAUCA 3' ||||||| |: :| ||:: ||||||| :|::| ||::|| ||| target 3': UCCGUACUCGGUG-GUGU--------GGGUAGUAUUUAAUUUUGAAG--ACUUGU-UAGA 5' |
-35.90 | 1 | RIC-seq |
| chr9:113792079:113792147:[-] | chr11:65206901:65206974:[+] | nonBSJ supported | Exon |
circRNA 5': UGUUGGCCAGGCUGGUCUUGAACUCCUGGCCUCAA---GUGAACCACCCGCCUCGGCCUCUCAAAGUGCUGG 3' ||:|||||||||||::||:||||||||:||||| :||| ||||||:||||:| |||:||||||||||| target 3':UACGACCGGUCCGACUGGAGCUUGAGGAUCGGAGGAGUAUACUAGGUGGGUGGAGUCAGAGGGUUUCACGACCC 5' |
-124.00 | 1 | RIC-seq |
| chr9:113794671:113794745:[-] | chr11:65205491:65205546:[+] | nonBSJ supported | Exon |
circRNA 5':AGGCAGGAUUCCCAC-CCUCCAGGA-GGAGCUUACACACGAUUAACAGAUAAUUACAAUUCAGUGUAACAAGUGUUA 3' |:|||||:| |||| || || || | |||||| || || ::||||| ||| |:| target 3':CUUGUCCUGA-GGUGAGGCUGUAAGGCC-C--AUGUGU-CU-------------UGAAGGGUCACCC--UUCUCGA 5' |
-35.90 | 1 | RIC-seq |
| chr9:113794698:113794745:[-] | chr11:65205473:65205546:[+] | nonBSJ supported | Exon |
circRNA 5':AGGCAGGAUUCCCAC-CC-----------------------UCCA---GGAGGAGCUUA-CACACGAUUAACAGAU 3' |:|||||:| |||| || :||| |||:||||| |||||: |||| target 3':CUUGUCCUGA-GGUGAGGCUGUAAGGCCCAUGUGUCUUGAAGGGUCACCCUUCUCGAUCGGUGUGUCACC-GUCUU 5' |
-46.70 | 1 | RIC-seq |
| chr9:113796166:113796240:[-] | chr11:65195331:65195401:[+] | nonBSJ supported | Exon |
circRNA 5':CACUGGUUUUCAGUUGCAUGUCAGAGGUGGAACUGACU-UGGAUG--UCUUUGAAUUGCU-GUUGAAUCUGGAGAU-GCU 3' |||| |:||:|: | || :|: |:| | :|| ||||:: |||: |||| |||||||: || target 3':GUGA----AGGUUAGGGGUU-GUAAAUAUGG-GGCACUUAGUUAAGAAGAAGUCGUACGGUCAAC---GACCUCUGUCGU 5' |
-36.40 | 1 | RIC-seq |
| chr9:113796422:113796452:[-] | chr11:65203179:65203213:[+] | nonBSJ supported | Exon |
circRNA 5':ACUCGGU---ACUGCA-GUGA-GAGAUGACAUAACC 3' |:|:|| || ||| :||| |||| ||| :||| target 3':GGGGUCAAGGUGCCGUGUACUCCUCUCCUG-GUUGU 5' |
-24.30 | 2 | RIC-seq |
| chr9:113796978:113797026:[-] | chr11:65212693:65212748:[+] | nonBSJ supported | Exon |
circRNA 5':AGACACUGAGUAACA------CAUA--UUGGGGCAGAGU---GAGGGGUGCGAUGAUGGA 3' ||||| ||| ||| ||| :||||:| |||: |||||| || |::| target 3':CUUGUG-CUCCGUGUCAGGACGUACGAGACCCUGGCUCGUGACUCCCC-CGGG--UGUCC 5' |
-40.70 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:65199611:65199662:[+] | target | - | chr11:65199613-65199614 | T>C | PACA-CA | ICGC |
| chr11:65199611:65199662:[+] | target | - | chr11:65199636-65199637 | C>T | RECA-EU | ICGC |
| chr11:65200396:65200439:[+] | target | - | chr11:65200428-65200429 | C>A | PACA-CA | ICGC |
| chr11:65206901:65206974:[+] | target | - | chr11:65206917-65206918 | A>G | LAML-KR | ICGC |
| chr11:65207234:65207261:[+] | target | - | chr11:65207246-65207247 | G>- | PACA-CA | ICGC |
| chr11:65207422:65207469:[+] | target | - | chr11:65207469-65207470 | T>C | LAML-KR | ICGC |
| chr11:65207455:65207482:[+] | target | - | chr11:65207469-65207470 | T>C | LAML-KR | ICGC |
| chr11:65212693:65212748:[+] | target | - | chr11:65212721-65212722 | A>G | PACA-CA | ICGC |
| chr9:113760957:113760989:[-] | circRNA | - | chr9:113760968-113760969 | G>T | RECA-EU | ICGC |