Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr10:31663387:31663407:[+] chr11:65199064:65199084:[+] nonBSJ supported Exon

circRNA 5':UCACCCAUUUAGGUAGGUGCU 3'


            ||||||:| |:| | |||


target  3':UGUGGGUGAUACUACCGACGU 5'

 -19.70 1 RIC-seq
chr10:31664187:31664223:[+] chr11:65191015:65191055:[+] nonBSJ supported Exon

circRNA 5':UUAGAGAUCCAGGCAGUCCCC-CUUGUCA---GUGCUAGGA 3'


            ||| | || ||||||||| |:||||| :|||||||


target  3':CGUCGCACGGAGCGUCAGGGGCGGACAGUUUGUACGAUCCA 5'

 -47.30 2 RIC-seq
chr10:31665771:31665819:[+] chr11:65195585:65195669:[+] nonBSJ supported Exon

circRNA 5':CCUCA------UCUUAAAAA-UAUCC-UGCUUC-----AUUCAUAAAGUU-----------------------GUGCCAACGGAA 3'


            |||| ||| ||:|| ::|:|| |||||:|||||: :||| ||||||


target  3':UGAGUGACUUAAGAUAAUAUAAUGGGUGUGGAGACCUUUAAGUGUUUCAGACUUAAGUCUAGAUACGUAUUCCUACGUUUGCCUA 5'

 -33.70 2 RIC-seq
chr10:31666443:31666469:[+] chr11:65198184:65198211:[+] nonBSJ supported Exon

circRNA 5':AUUCAUUAAGGUGGUUUUAAU-UUCCAA 3'


            ||||:| | ||: :||||


target  3':CGAGUGACGGCUCCGUUACGGUGAGGUC 5'

 -12.60 1 RIC-seq
chr10:31668479:31668518:[+] chr11:65192025:65192085:[+] nonBSJ supported Exon

circRNA 5': UGGGUCAAUCUG------UGCCAGUCACACACAGGGCAGUC--------------------UGCCG 3'


            || || |||: : |||||| |:|||| :|||


target  3':GACGAAGG-AGAUUAUAUAGGGGUCAGA-----UUCCGUAAAUUUUAAUUUGUCGAGAAGUUGCGGG 5'

 -19.70 2 RIC-seq
chr10:31669246:31669299:[+] chr11:65212475:65212521:[+] nonBSJ supported Exon

circRNA 5':UUGGCUUGAAA----GACUUAAUUAGUUUCAGGUUCAGCUUUGGUUUUGGUGUUGAGG 3'


            ||||||||| ||||: || |||:|: :|||| :|: :||:|:|


target  3':UACCGAACUUAAAAACUGAG---AUAC--GUCUAG--UGAAAAUAG-----UAAUUUCC 5'

 -24.90 1 RIC-seq
chr10:31669408:31669451:[+] chr11:65203086:65203135:[+] nonBSJ supported Exon

circRNA 5':GGCAGUGGUGCCAACCCAAUCUCUCUAUUGAGAGUUUUC-----------UACCA 3'


            |||||| :|||||| |: :||||:: :|||


target  3': UGUCACAGUGGUUGGUCUACAC-GG---UUCUCGGUCUCGUCCACUUCUGUGGA 5'

 -27.40 1 RIC-seq
chr10:31673227:31673248:[+] chr11:65191991:65192010:[+] nonBSJ supported Exon

circRNA 5':UGGGCUAUGAACUGGUGCUGGU 3'


            |||||| ||||| |:|:


target  3': UCCGAUUCUUGAAGA-GGCUC 5'

 -18.30 2 RIC-seq
chr10:31674402:31674419:[+] chr11:65196672:65196689:[+] nonBSJ supported Exon

circRNA 5':UUGAUUUCAGCAUUUCUU 3'


            || |||||||||:|:


target  3':UACAUAAGUCGUAAGGGU 5'

 -16.60 2 RIC-seq
chr10:31674701:31674754:[+] chr11:65210204:65210257:[+] nonBSJ supported Exon

circRNA 5':AGCCUCAGCCUCUCAAAGU-GCUGGAAUUACAGGCAUGAGCCACCACACCUGGCC 3'


            |||||||||||:| ||| ||||| |:||||||| || ||||||| ||||||


target  3':ACGGAGUCGGAGGGC-UCAUCGACCCUGAUGUCCGCACGCGGUGGUACGGACCGA 5'

 -84.30 1 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr11:65195585:65195669:[+] target rs566485035 chr11:65195588-65195589 C>T Biological Father: Schizophrenia GWAS Catalog
chr11:65195585:65195669:[+] target - chr11:65195649-65195650 A>G RECA-EU ICGC