Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865398:139865429:[+] chr3:40508273:40508304:[+] nonBSJ supported Exon

circRNA 5': CAAGUCUUCCAAUAAUCUCAAGGUCUUCCAGA 3'


            |||: ||||||| |: ||||


target  3':GGUUU-GAAGGUUUAAAACGGAUAUGGCGGUCC 5'

 -18.10 1 RIC-seq
chrX:139865414:139865447:[+] chr3:40508273:40508305:[+] nonBSJ supported Exon

circRNA 5':CUCAAGGUCUUCCAGAUAAU-CCUGAGCUUCCAGA 3'


            ||||: ||||||:|| |||: :|: ||||


target  3':UGGUUU--GAAGGUUUAAAACGGAUAUGGCGGUCC 5'

 -25.30 1 RIC-seq