Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865587:139865606:[+] chr11:118936287:118936306:[-] nonBSJ supported Exon

circRNA 5':CAGGAAAAUCCACGU----CUUCC 3'


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target  3':CUCCUUC----UGCACCUCGAAGA 5'

 -8.00 1 RIC-seq
chrX:139865588:139865606:[+] chr11:118936289:118936306:[-] nonBSJ supported Exon

circRNA 5':AGGAAAAUCCACGU----CUUCC 3'


            |||| |||| ||||


target  3': CCUUC----UGCACCUCGAAGA 5'

 -6.00 1 RIC-seq
chrX:139866620:139866628:[+] chr11:118936297:118936306:[-] nonBSJ supported Exon

circRNA 5':AGGU-CUUCC 3'


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target  3':ACCUCGAAGA 5'

 -5.60 1 RIC-seq