Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865869:139865900:[+] chr19:12754729:12754762:[-] nonBSJ supported Exon

circRNA 5':ACCA-----AAUCCAGG-UCUUCCAGUCAAUCCACAUC 3'


            ||| | ||||| |||| |||| ||||:


target  3':GGGUACCGCUGUGGUCCUAGAA-GUCACC---GUGUGA 5'

 -20.30 16 RIC-seq
chrX:139865870:139865900:[+] chr19:12754729:12754762:[-] nonBSJ supported Exon

circRNA 5': CCA-----AAUCCAGG-UCUUCCAGUCAAUCCACAUC 3'


            ||| | ||||| |||| |||| ||||:


target  3':GGGUACCGCUGUGGUCCUAGAA-GUCACC---GUGUGA 5'

 -20.00 1 RIC-seq