Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866730:139866751:[+] chr19:53727281:53727300:[-] nonBSJ supported Exon

circRNA 5': AGUCUUCCAUCAACUGGCUCAA 3'


            || |:|||| ||||||||


target  3':UUCUGGAGGUC---GACCGAGUG 5'

 -22.00 1 RIC-seq
chrX:139866730:139866758:[+] chr19:53727281:53727316:[-] nonBSJ supported Exon

circRNA 5': AGUCUUCCAUCAACUGGCUCAAUA--------UCCAU 3'


            || |:|||| |||||||| ||||:


target  3':UUCUGGAGGUC---GACCGAGUGUUCUCUUCGCAGGUGA 5'

 -24.20 1 RIC-seq
chrX:139866730:139866759:[+] chr19:53727281:53727316:[-] nonBSJ supported Exon

circRNA 5': AGUCUUCCAUCAACUGGCUCAAUA--------UCCAUG 3'


            || |:|||| |||||||| ||||:


target  3':UUCUGGAGGUC---GACCGAGUGUUCUCUUCGCAGGUGA 5'

 -24.40 21 RIC-seq