Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865896:139865924:[+]	chr17:8090519:8090549:[+]	nonBSJ supported	Exon	circRNA 5':ACAUCUUCCGGAAAA-AAUCCAGG-UCUUCC 3' \|\|:\| \|\|\| \|\|:\|\|\|\|\| \|\|\|:\| target 3':CGUGGCGACCCUAAGCUUGGGUCCUAGAGGA 5'	-22.60	1	RIC-seq
chrX:139865913:139865924:[+]	chr17:8090519:8090532:[+]	nonBSJ supported	Exon	circRNA 5': UCCAGG-UCUUCC 3' \|\|\|\|\|\| \|\|\|:\| target 3':UGGGUCCUAGAGGA 5'	-15.00	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865896:139865924:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC