Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866681:139866690:[+] chr17:26207316:26207325:[-] nonBSJ supported CDS

circRNA 5':CCAGCAUCUC 3'


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target  3':AGUCGUAGAA 5'

 -12.90 1 RIC-seq
chrX:139866699:139866709:[+] chr17:26207316:26207327:[-] nonBSJ supported CDS

circRNA 5':CCAGCAUCUUC 3'


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target  3':AGUCGUAGAAGU 5'

 -16.00 1 RIC-seq
chrX:139866699:139866717:[+] chr17:26207316:26207335:[-] nonBSJ supported CDS

circRNA 5':CCAGCAUCUUC-AUGUCUUC 3'


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target  3':AGUCGUAGAAGUUACCGAGA 5'

 -20.60 13 RIC-seq