Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865591:139865609:[+] chr3:48238061:48238077:[+] nonBSJ supported Exon

circRNA 5':AAAAUCCACGUCUUCCAGG 3'


            |||:||||| |:||||:


target  3': UUUGGGUGC-GGAGGUUG 5'

 -21.40 1 RIC-seq
chrX:139866504:139866520:[+] chr3:48238064:48238079:[+] nonBSJ supported Exon

circRNA 5':GAAAAUCCACGUCUUCC 3'


            ||||:|||||:||:|


target  3':AUUUUGGGUGCGGAGG 5'

 -21.80 3 RIC-seq