Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865864:139865869:[+] chr18:3606597:3606602:[+] nonBSJ supported Exon

circRNA 5':CUUCCA 3'


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target  3':AAAGGA 5'

 -4.50 1 RIC-seq
chrX:139865865:139865884:[+] chr18:3606565:3606588:[+] nonBSJ supported Exon

circRNA 5':UUCCAC--CAAAUCCAGG-UCUU 3'


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target  3':UAGGUGAAGUUUAAGUCAAAGAAG 5'

 -14.80 1 RIC-seq
chrX:139865865:139865886:[+] chr18:3606564:3606588:[+] nonBSJ supported Exon

circRNA 5':UUCCAC--CAAAUCCAGG-UCUUCC 3'


            ||||| ||||| ||| |||||


target  3':UAGGUGAAGUUUAAGUCAAAGAAGA 5'

 -18.30 16 RIC-seq