5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865770:139865787:[+] | chr16:28993509:28993520:[+] | nonBSJ supported | Exon |
circRNA 5': CCAGAAAGAAAUCCAGGU 3' ||||| ||||| target 3':GGGUCU-------GGUCCU 5' |
-13.50 | 10 | RIC-seq |
| chrX:139865809:139865826:[+] | chr16:28993509:28993520:[+] | nonBSJ supported | Exon |
circRNA 5': CCAGAAAGAAAUCCAGGU 3' ||||| ||||| target 3':GGGUCU-------GGUCCU 5' |
-13.50 | 6 | RIC-seq |
| chrX:139865809:139865832:[+] | chr16:28993518:28993545:[+] | nonBSJ supported | Exon |
circRNA 5':CCAGAAAGAAAUCCAGGUC------UUCCA 3' |||| |||| :|| |||| target 3':CGUCUGUAG-UAGGG-UAGUGAAUAAAGGG 5' |
-12.40 | 1 | RIC-seq |
| chrX:139866078:139866109:[+] | chr16:28993514:28993542:[+] | nonBSJ supported | Exon |
circRNA 5':UACGUCUUCCAAAAAAGCCAUGUCUUCCAGAA 3' ||:|| ||| :| |:| |:||||| target 3':CUGUAGUAGGGUAG--UGA-AUAAAGGGUCUG 5' |
-18.60 | 12 | RIC-seq |
| chrX:139866081:139866109:[+] | chr16:28993514:28993540:[+] | nonBSJ supported | Exon |
circRNA 5': GUCUUCCAAAAAAGCCAUGUCUUCCAGAA 3' ||| ||| :| |:| |:||||| target 3':GUAGUAGGGUAG--UGA-AUAAAGGGUCUG 5' |
-15.20 | 1 | RIC-seq |