Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865510:139865520:[+] chr14:50053568:50053588:[+] nonBSJ supported Exon

circRNA 5':AGUCUU----------CCAGU 3'


            ||||: ||||


target  3':CCAGAGCGAUACAACGGGUCC 5'

 -8.00 20 RIC-seq
chrX:139865527:139865571:[+] chr14:50053518:50053578:[+] nonBSJ supported Exon

circRNA 5':AGUCUUCCA-GCAAAUC--CAGUC----UUC-CAGCA--------AUUACUGGUCUUCCAC 3'


            || :||| || |||| ||| ||| |:|||||:|| |||


target  3':ACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCCGCGCUAGGGUGAUGACUAGUC-GUGC 5'

 -21.20 1 RIC-seq
chrX:139865527:139865571:[+] chr14:50053518:50053587:[+] nonBSJ supported Exon

circRNA 5':AGUCUUCCAGCAAA-UCCAGUCUUCCA-GCA------------------------AUUACUGGUCUUCCAC 3'


            ||||: :|||| || ||| |:|||||:|| |||


target  3': CAGAGCGAUACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCCGCGCUAGGGUGAUGACUAGUC-GUGC 5'

 -21.90 17 RIC-seq
chrX:139865527:139865572:[+] chr14:50053531:50053588:[+] nonBSJ supported Exon

circRNA 5':AGUCUUCCAGCAAA-UCCAGUCUUCCA-GCAA-------UUACUGGUC---UUCCACC 3'


            ||||: :|||| || ||| |:|| ||: |:||||


target  3':CCAGAGCGAUACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCCGCGCUAGGGUGA 5'

 -21.50 2 RIC-seq
chrX:139865527:139865584:[+] chr14:50053524:50053588:[+] nonBSJ supported Exon

circRNA 5':AGUCUUCCAGCAAA-UCCAGUCUUCCA-GCAA-------UUACUGGUC---UUCCACCAAAUCCAGAUCU 3'


            ||||: :|||| || ||| |:|| ||: |:|||| |: ||||


target  3':CCAGAGCGAUACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCCGCGCUAGGGUGA--UGA--CUAG 5'

 -23.00 16 RIC-seq
chrX:139865997:139866008:[+] chr14:50053471:50053483:[+] nonBSJ supported Exon

circRNA 5':AGUA-ACCUC-CCA 3'


            || |||:| ||


target  3':CCAAGUGGGGAGG 5'

 -10.10 2 RIC-seq
chrX:139866000:139866015:[+] chr14:50053470:50053493:[+] nonBSJ supported Exon

circRNA 5':AACCU---CC----CAGUCUUCC 3'


            |||| || || :|:|||


target  3':CUGGACCCGGCCAAGUGGGGAGGA 5'

 -12.60 16 RIC-seq
chrX:139866004:139866013:[+] chr14:50053565:50053574:[+] nonBSJ supported Exon

circRNA 5':UCCCAGUCUU 3'


            ||||| ||


target  3':CGGGUCCGAC 5'

 -8.90 1 RIC-seq
chrX:139866616:139866666:[+] chr14:50053532:50053574:[+] nonBSJ supported Exon

circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUCCAA 3'


            ||||||: ||| |||| :|| || || |:|||


target  3':CGGGUCCGACCUCACGUCA-----CCGAUAAGUGUC--CGCGCU-AGGGUG 5'

 -28.10 5 RIC-seq
chrX:139866616:139866666:[+] chr14:50053533:50053574:[+] nonBSJ supported Exon

circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCUUCCAA 3'


            ||||||: ||| |||| :|| || || |:|||


target  3':CGGGUCCGACCUCACGUCA-----CCGAUAAGUGUC--CGCGCU-AGGGU 5'

 -28.10 1 RIC-seq
chrX:139866620:139866638:[+] chr14:50053470:50053488:[+] nonBSJ supported Exon

circRNA 5':AGGUCUUC-CAGCAUCUCCA 3'


            ||:| || | :||||


target  3':CCCGGCCAAGUGG-GGAGGA 5'

 -14.10 18 RIC-seq