5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866292:139866354:[+] | chr5:140891487:140891525:[+] | nonBSJ supported | 3UTR |
circRNA 5':AUCCUUGUCUUCCCUCAAAUCCAUAGCUUCCGAAAAAUCCAGGUCUUCCAGGAAAUCCGUGUC 3' |||||:|||| || :||||| ||||| |||| |:||: target 3':AAGGAAUAGAAUGGUG---GGGUAUGA---------------CAGAA---CCUU---GUACGU 5' |
-30.20 | 2 | RIC-seq |
| chrX:139866753:139866770:[+] | chr5:140744705:140744724:[+] | nonBSJ supported | CDS |
circRNA 5':AUCCAUGUC--UUCCAACGU 3' ||| :|| |||| |:| target 3':AAGG-GCAAAUAAGGGAGUAG 5' |
-9.40 | 1 | RIC-seq |
| chrX:139866369:139866394:[+] | chr5:140768372:140768408:[+] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCAACAAAGCCAUG---------------UCUUCC 3' | |||||| ||:| ||| ||||| target 3':AC-GAAGGU---UUUGAUACCUUAUAAGAAACUGAAGAAGU 5' |
-12.30 | 1 | RIC-seq |
| chrX:139866383:139866396:[+] | chr5:140768400:140768411:[+] | nonBSJ supported | Intron |
circRNA 5':GCCAUGUCUUCCAU 3' || || |||||| target 3': GGAAC-GAAGGUU 5' |
-11.00 | 3 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:139866292:139866354:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |