Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866040:139866101:[+]	chr7:106299762:106299808:[-]	nonBSJ supported	3UTR	circRNA 5':UCCAAGUCUUCCGGAUAAUUUGGGUCUUCCUGAAAAUC-UACGUCUUCCAAAAAAGCCAUGUC 3' \|\|\| \|\|\|\|\| \|:\|\|\|\|\|: \|\|\|\| :\|\| :\|\|\|\|:\| target 3':UGGUCAAGAAG---UGUUAAAUAAGUAAAAAAAAUUAGUGUG-------------UGGUAUAC 5'	-19.00	1	RIC-seq
chrX:139866065:139866120:[+]	chr7:106299747:106299804:[-]	nonBSJ supported	3UTR	circRNA 5':CUUCCUGAAAAUCUACGUCUUCCAAAAAAGCCAUGUCUUC-CAGAA--------------AAUC-CACAUCU 3' \|\|\|\|\|\| \|\|:\| \|\|\|:\|\|\| \|\|\|\|\| \|\|: \|\|\|\| \|\|\|\|:\| target 3':UGAGGACA-UUGG-------------UUUUGGUCAAGAAGUGUUAAAUAAGUAAAAAAAAUUAGUGUGUGGU 5'	-26.40	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr7:106299747:106299804:[-]	target	-	chr7:106299778-106299779	T>A	LAML-KR	ICGC
chr7:106299747:106299804:[-]	target	-	chr7:106299792-106299793	T>C	LAML-KR	ICGC
chr7:106299762:106299808:[-]	target	-	chr7:106299778-106299779	T>A	LAML-KR	ICGC
chr7:106299762:106299808:[-]	target	-	chr7:106299792-106299793	T>C	LAML-KR	ICGC