Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866495:139866539:[+] chr8:9760118:9760160:[-] nonBSJ supported Exon

circRNA 5':CGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCA-UGUCUUCCA 3'


            ||||:|| |||| || ||| | :|||||


target  3':ACAGAGGGAACCC-AGGUACAUCCAAUAACA-CGGAGAGGGAAGG 5'

 -27.90 1 RIC-seq
chrX:139866495:139866557:[+] chr8:9760118:9760184:[-] nonBSJ supported Exon

circRNA 5':CGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCA-UGUCUUCCA--GAAAAUCCAC-GUCUU--CCA 3'


            ||||:|| |||| || ||| | :||||| | ||| :|||: ||


target  3':ACAGAGGGAACCC-AGGUACAUCCAAUAACA-CGGAGAGGGAAGGAGACGUCGAGGACCUAGAGACGGA 5'

 -33.80 1 RIC-seq