Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865686:139865700:[+] chr1:11212437:11212452:[+] nonBSJ supported Exon

circRNA 5':AUCUGUGUC-UUCCAC 3'


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target  3':GAGACAUAGCAAGGUU 5'

 -17.00 3 RIC-seq
chrX:139866686:139866697:[+] chr1:11212443:11212454:[+] nonBSJ supported Exon

circRNA 5':AUCUCUGUGUCU 3'


            |||||||:||


target  3':AAGAGACAUAGC 5'

 -15.70 2 RIC-seq
chrX:139866686:139866700:[+] chr1:11212440:11212454:[+] nonBSJ supported Exon

circRNA 5':AUCUCUGUGUC-UUCC 3'


            |||||||:|| |||


target  3':AAGAGACAUAGCAAG 5'

 -16.70 10 RIC-seq