Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866669:139866694:[+] chr6:2272771:2272795:[+] nonBSJ supported Exon

circRNA 5':UCUC-CACGUC-UUCCAGCAUCUCUGUG 3'


            ||| ||| || :|| |||| ||:


target  3':GGAGUGUGAAGUGAGACCGUA---ACGU 5'

 -14.40 1 RIC-seq
chrX:139866726:139866748:[+] chr6:2272776:2272795:[+] nonBSJ supported Exon

circRNA 5':ACC-CAGUCUUCCAUCAACUGGCU 3'


            || || ||| ||: |||||


target  3': GGAGUGUGAA-GUGA--GACCGU 5'

 -14.80 16 RIC-seq