Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865782:139865844:[+]	chr4:165110711:165110778:[+]	nonBSJ supported	Exon	circRNA 5':CCAGGU-CUUCCA-GUCAAUCAGUGUCUU-----CCAGAAAGAAAUCCAGGUCUUC-CAGUCAGUCA-GUGU 3' \|\|:\|: \|\| \|\|\| \|\|\| \|:\| \|\|:\|\|\|\| \|\|\|\|\| \|\| \|\|\|\| \|:\|\| \|\|\| \|\|\|: :\|\| target 3':AGUUCGUGAUGGUCCAG-UGGACAUAGAACUAGUGGUCUCUCGUGAGGU-CGGACCUGUC-GUCGUGGUAC 5'	-47.20	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr4:165110711:165110778:[+]	target	-	chr4:165110730-165110731	C>A	LINC-JP	ICGC
chr4:165110711:165110778:[+]	target	-	chr4:165110734-165110735	A>T	RECA-EU\|LAML-KR	ICGC
chr4:165110711:165110778:[+]	target	-	chr4:165110771-165110772	G>C	LAML-KR	ICGC