Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866670:139866694:[+] chr5:127365563:127365585:[-] nonBSJ supported Intron

circRNA 5':CUCCAC--GUCUUCCAGCAUCUCUGUG 3'


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target  3':AAGGUAACCAGAUA----UAGAGACAA 5'

 -17.40 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr5:127365563:127365585:[-] target - chr5:127365581-127365582 C>T PACA-CA ICGC