Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866200:139866214:[+] chr15:69863215:69863229:[+] nonBSJ supported Exon

circRNA 5':AAAUCCGGGUCUUCC 3'


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target  3':AUUGGGCCCAGAAGA 5'

 -23.50 13 RIC-seq
chrX:139866200:139866230:[+] chr15:69863208:69863229:[+] nonBSJ supported Exon

circRNA 5':AAAUCCGGGUCUUCCAGGAAAUCCGUGUCUU 3'


            ||:|||||||||| |:|:|:


target  3':AUUGGGCCCAGAAGA---------CGCGGGU 5'

 -26.90 12 RIC-seq