Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865755:139865772:[+] chr13:33018077:33018096:[-] nonBSJ supported CDS

circRNA 5': GUCAA-UCAGUGUCUUCCA 3'


            ||| |||:||||||||


target  3':CCAGAAAAGUUACAGAAGGA 5'

 -21.40 8 RIC-seq
chrX:139865794:139865811:[+] chr13:33018077:33018096:[-] nonBSJ supported CDS

circRNA 5': GUCAA-UCAGUGUCUUCCA 3'


            ||| |||:||||||||


target  3':CCAGAAAAGUUACAGAAGGA 5'

 -21.40 10 RIC-seq
chrX:139865833:139865860:[+] chr13:33018077:33018106:[-] nonBSJ supported CDS

circRNA 5': GUCAG-UCAGUGUCUUCCAGAAAAAUCUA 3'


            ||| |||:|||||||| |||


target  3':CCAGAAAAGUUACAGAAGGAGAAGUGAGAC 5'

 -22.10 19 RIC-seq
chrX:139865833:139865869:[+] chr13:33018077:33018103:[-] nonBSJ supported CDS

circRNA 5': GUCAG-UCAGUGUCUUCCAGAAAAAUCUACGUCUUC-CA 3'


            ||| |||:|||||||| ||||| |


target  3':CCAGAAAAGUUACAGAAGG-------------AGAAGUGA 5'

 -23.00 1 RIC-seq
chrX:139866415:139866447:[+] chr13:33017425:33017461:[-] nonBSJ supported CDS

circRNA 5': CCUACUUG-UGUCUU--CCAACAAAGGUACGU-CUUC 3'


            ||: |:|| |||| ||| | |||:| ||:


target  3':CGGG-GGACGACAGUCCUGGUCGGUUGAAUGUACGAGA 5'

 -18.40 11 RIC-seq
chrX:139866418:139866452:[+] chr13:33017419:33017451:[-] nonBSJ supported CDS

circRNA 5':ACUUGUGUCUUCCAACAA-AGGUACGUCUUCCAACA 3'


            |: ||:|::| ||| |: |||||


target  3':AGGUAACGGGGGACGACAGUCCUGGUC---GGUUGA 5'

 -17.80 1 RIC-seq
chrX:139866614:139866647:[+] chr13:33018068:33018126:[-] nonBSJ supported CDS

circRNA 5':AUCUC------------CAG-GUCUUCCAG--CAUCUCCA----GGG-------CUUCCA 3'


            |||| ||: ||||||| || ||| ||| ||:||


target  3':AAGAGAAGACCAGAAAAGUUACAGAAGGAGAAGU-GAGACUCUACCCAGGACUAGAGGGC 5'

 -21.90 17 RIC-seq
chrX:139866614:139866647:[+] chr13:33018069:33018126:[-] nonBSJ supported CDS

circRNA 5':AUCUC------------CAG-GUCUUCCAG--CAUCUCCA----GGG-------CUUCCA 3'


            |||| ||: ||||||| || ||| ||| ||:||


target  3': AGAGAAGACCAGAAAAGUUACAGAAGGAGAAGU-GAGACUCUACCCAGGACUAGAGGGC 5'

 -21.40 1 RIC-seq
chrX:139866614:139866647:[+] chr13:33018078:33018126:[-] nonBSJ supported CDS

circRNA 5':AUCUC--CAG-GUCUUCCAG--CAUCUCCA----GGG-------CUUCCA 3'


            ||| ||: ||||||| || ||| ||| ||:||


target  3':CAGAAAAGUUACAGAAGGAGAAGU-GAGACUCUACCCAGGACUAGAGGGC 5'

 -21.40 1 RIC-seq
chrX:139866616:139866629:[+] chr13:33018113:33018126:[-] nonBSJ supported CDS

circRNA 5':CUCCAGGUCUUCCA 3'


            ||| |:|||:||


target  3':CAGGACUAGAGGGC 5'

 -15.90 12 RIC-seq