Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865437:139865482:[+] chr2:28117490:28117517:[+] nonBSJ supported Exon

circRNA 5':GAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCGG 3'


            ||| ||||| :|||| ||||| |||||


target  3':AUCGUAGGUCA---GGGUGAA-AAGGU-------------AAGGC 5'

 -25.20 1 RIC-seq
chrX:139865437:139865483:[+] chr2:28117489:28117517:[+] nonBSJ supported Exon

circRNA 5':GAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCGGA 3'


            ||| ||||| :|||| ||||| ||||||


target  3':AUCGUAGGUCA---GGGUGAA-AAGGU-------------AAGGCC 5'

 -28.30 16 RIC-seq