Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866028:139866065:[+] chr21:15685375:15685415:[+] nonBSJ supported Exon

circRNA 5':UCUUCC-CAACAA-UCCAAGUCUUCC-GGAUAAUUUGGGUC 3'


            ||| |||| |||||:||| ||| ::||:


target  3':GGAAACCGUUGACGAGGUUUAGACCUUCCUCUCGUGUCCGA 5'

 -22.10 9 RIC-seq
chrX:139866033:139866065:[+] chr21:15685375:15685409:[+] nonBSJ supported Exon

circRNA 5':CCAACAA-UCCAAGUCUUCC-GGAUAAUUUGGGUC 3'


            |||| |||||:||| ||| ::||:


target  3':CGUUGACGAGGUUUAGACCUUCCUCUCGUGUCCGA 5'

 -21.60 1 RIC-seq