Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866335:139866362:[+] chr2:201735768:201735789:[-] nonBSJ supported 3UTR

circRNA 5':UCUUCCAGGAAAUCCGUGUCUUCCAGCA 3'


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target  3':UGAAGGUCCUAU--GC-CUGAA---CGA 5'

 -18.00 25 RIC-seq
chrX:139866337:139866362:[+] chr2:201735771:201735789:[-] nonBSJ supported 3UTR

circRNA 5':UUCCAGGAAAUCCGUGUCUUCCAGCA 3'


            ||||||| || | ||| ||


target  3': AGGUCCUAU--GC-CUGAA---CGA 5'

 -14.00 1 RIC-seq