Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865969:139865992:[+] chr10:60759456:60759477:[+] nonBSJ supported Exon

circRNA 5': CAUGUCUUCCAGAAAA-UCCAUGUC 3'


            ||||: ||||| ||| ||:


target  3':GGUACGU----UCUUUGGAGGAACGA 5'

 -12.20 1 RIC-seq
chrX:139865985:139866005:[+] chr10:60759461:60759477:[+] nonBSJ supported Exon

circRNA 5':UCCAUGUCUUCCAGUAACCUC 3'


            |||||: || ||||||


target  3': GGUACGU----UCUUUGGAGG 5'

 -13.10 1 RIC-seq
chrX:139865985:139866011:[+] chr10:60759456:60759477:[+] nonBSJ supported Exon

circRNA 5':UCCAUGUCUUCCAGUAACCUCCCAGUC 3'


            |||||: || ||||||| |:


target  3': GGUACGU----UCUUUGGAGGAACGA 5'

 -18.00 18 RIC-seq