Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865678:139865699:[+] chr10:6627532:6627558:[+] nonBSJ supported Exon

circRNA 5': CCAGAAAAAU-CU----GUGUCUUCCA 3'


            ||||||| |: |::| |||


target  3':AGGUCUUUGUCCGGUCUUCGUAU-AGGA 5'

 -11.90 1 RIC-seq
chrX:139865678:139865708:[+] chr10:6627532:6627558:[+] nonBSJ supported Exon

circRNA 5': CCAGAAAAAUCUGUGUCUUCCACCAAAUCCA 3'


            ||||||| | |:| || ||||


target  3':AGGUCUUUGU---C-CGGUCUUC-GUAUAGGA 5'

 -14.90 20 RIC-seq