Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865510:139865556:[+]	chr15:21937803:21937861:[-]	nonBSJ supported	Exon	circRNA 5':AGUCUUCCAGUAAAUCAAGUCUU-------------CCAGCAAA---UCCAGUCUUCCAGCAA 3' \|\|\|\| \|\|\| \|\|\|\| \|\|:\|: \|\|\|\| \|\|\|\|\|\| \|\|\|\|\| target 3':CCAGACA-UCA-UUAGCUCGGGUCACAAGACCGUACGGUCACUUAAGAGGUCAUU--GUCGUA 5'	-27.80	1	RIC-seq
chrX:139865526:139865556:[+]	chr15:21937822:21937861:[-]	nonBSJ supported	Exon	circRNA 5':AAGUCUUCCAGCAAAUCCAG-----UCUUC-----CAGCAA 3' \|\|\| \|\|\| \|\|\| \|\|\|\| \|\|\|:\| \|\|\|\|\| target 3':GUCACAAGACCGUAC-GGUCACUUAAGAGGUCAUUGUCGUA 5'	-19.60	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr15:21937803:21937861:[-]	target	-	chr15:21937824-21937825	G>C	LAML-KR	ICGC
chr15:21937822:21937861:[-]	target	-	chr15:21937824-21937825	G>C	LAML-KR	ICGC