Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865777:139865824:[+]	chr9:2452183:2452248:[-]	nonBSJ supported	Intron	circRNA 5': GAAAUCCAGGU-CUUCCAG-----------------UCAAUCAGUGUCUUCCA--GAAAGAAAUCCAG 3' \| \|\|\|\|\|\|::\| \|\|\|\|\|\|\| \|\| \|\|\|\|\|:\| \|\|\| \|\|\|\|\|\| target 3':GC-UUAGGUUUAUGAAGGUCUUCUCUCUUUCAUCAAAAGAAAAAGACAGAGGAACCCUUA--UUAGGUG 5'	-32.10	1	RIC-seq
chrX:139865777:139865849:[+]	chr9:2452183:2452234:[-]	nonBSJ supported	Intron	circRNA 5': GAAAUCCAGGU-CUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAG-UCAGUCAGUGUCUUCC 3' \| \|\|\|\|\|\|::\| \|\|\|\|\|\|\| \|\|\| \|\|\|\|\| :\|\| \|\|\| \|\| \|\|\|\|\|:\| target 3':GC-UUAGGUUUAUGAAGGUCU---------------UCUCUCUUUCA--UCAAAAGAAAAAG------ACAGAGGA 5'	-30.70	1	RIC-seq