Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866216:139866235:[+] chr2:102509651:102509672:[+] nonBSJ supported CDS

circRNA 5': GGAAAUCCGUGUCUU-CCAGC 3'


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target  3':ACCUACAUGAACAGAAUGGUCU 5'

 -16.30 2 RIC-seq
chrX:139866256:139866290:[+] chr2:102509650:102509684:[+] nonBSJ supported CDS

circRNA 5':AGC---CAUGUCUUCCAG-ACUAUCCAUGUCUU-CCAGAA 3'


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target  3':ACGUAAGUACUCACCUACAUGA-----ACAGAAUGGUCUA 5'

 -17.70 13 RIC-seq
chrX:139866258:139866290:[+] chr2:102509650:102509678:[+] nonBSJ supported CDS

circRNA 5':CCAUGUCUUCCAG-ACUAUCCAUGUCUU-CCAGAA 3'


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target  3': GUACUCACCUACAUGA-----ACAGAAUGGUCUA 5'

 -16.30 11 RIC-seq