Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865703:139865735:[+] chr17:18422872:18422897:[-] nonBSJ supported Exon

circRNA 5':AAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCA 3'


            ||| :|||||| :||||:||||||


target  3':AUAGAG-UAGAAGG------GGAUCGAGAAGGA 5'

 -28.00 1 RIC-seq
chrX:139865703:139865754:[+] chr17:18422872:18422928:[-] nonBSJ supported Exon

circRNA 5':AAUCCAAGUCUUCCAGUAAAUCUAGUUCUUCCA-------GAAAA-AUCUAGAU--CU-UCCA 3'


            ||| :|||||| :||||:|||||| |||| |: |||: || ||||


target  3':AUAGAG-UAGAAGG------GGAUCGAGAAGGAGUGACCACUUUCGUGCCUCUGUCGACAGGUC 5'

 -30.80 11 RIC-seq