Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865876:139865923:[+]	chr3:97593997:97594035:[+]	nonBSJ supported	CDS	circRNA 5': CCAGGUCUUC-CAGUCAAUCCACAUCUUCCGGAAAAAAUCCAGGUCUUC 3' \|\|\|:\|\| \|:\| \|\|\|\| \|\|\|\|\|\| :\|\|\| \|\|\| \|\|\|: target 3':GGGUUCAUAGGAGUCA--------UAGAAG--UUUUCAUAGUAA-AGAGU 5'	-21.40	29	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865876:139865923:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC