Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865380:139865442:[+]	chr1:227598924:227598977:[-]	nonBSJ supported	Exon	circRNA 5':CGGGUCUUCCAGCGACUUCAAGUCUUCCAAUAAUC-UCAAG---GUCUUCCAGAUAAUCCUG-AGCUU 3' \|\|\|:\| \|\|\| \|\| \|\|\|\|\|\| \|\|\|\|\|\| \|\|\| :\|\| \|\|\|\|\|\| \|\|\|\|\| \|:\|\| target 3':UCCCGG------GCUU-AG---AGAAGG-UAUUAGAAGUAAACGUAGU-GGUCUA--AGGACUUUGAC 5'	-42.00	10	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr1:227598924:227598977:[-]	target	-	chr1:227598953-227598954	T>C	LAML-KR	ICGC
chr1:227598924:227598977:[-]	target	-	chr1:227598961-227598962	C>T	LAML-KR	ICGC