Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866783:139866817:[+]	chr14:99439340:99439371:[-]	nonBSJ supported	Exon	circRNA 5':GAUCUUCUGACAUUCAG-GUCUUCCAG--UGUCUGCAA 3' \|\|\|\|\|\|\| :\|\|\| \|:\|: \|\| :\|\|\|\|\|\|\| target 3': UAGAAGA-----GGUCUCGGGCGGCGAAGCAGACGUG 5'	-28.10	9	RIC-seq
chrX:139866783:139866825:[+]	chr14:99439340:99439375:[-]	nonBSJ supported	Exon	circRNA 5':GAUCUUCUGACAUUCAG-GUCUUCCAG--UGUCUGCAAUAUCCAGG 3' \|\|\|\|\|\|\| :\|\|\| \|:\|: \|\| :\|\|\|\|\|\|\| \|\|\|\| target 3': UAGAAGA-----GGUCUCGGGCGGCGAAGCAGACGU----GGUCG 5'	-32.60	16	RIC-seq
chrX:139866785:139866817:[+]	chr14:99439342:99439371:[-]	nonBSJ supported	Exon	circRNA 5':UCUUCUGACAUUCAG-GUCUUCCAG--UGUCUGCAA 3' \|\|\|\|\| :\|\|\| \|:\|: \|\| :\|\|\|\|\|\|\| target 3': GAAGA-----GGUCUCGGGCGGCGAAGCAGACGUG 5'	-24.80	1	RIC-seq
chrX:139866785:139866825:[+]	chr14:99439342:99439375:[-]	nonBSJ supported	Exon	circRNA 5':UCUUCUGACAUUCAG-GUCUUCCAG--UGUCUGCAAUAUCCAGG 3' \|\|\|\|\| :\|\|\| \|:\|: \|\| :\|\|\|\|\|\|\| \|\|\|\| target 3': GAAGA-----GGUCUCGGGCGGCGAAGCAGACGU----GGUCG 5'	-29.30	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866783:139866817:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC
chrX:139866783:139866825:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC
chrX:139866785:139866817:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC
chrX:139866785:139866825:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC