Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866331:139866345:[+] chr5:141865157:141865171:[+] nonBSJ supported Intron

circRNA 5':CAGGUCUUCCAGGAA 3'


            |||: ||||


target  3':CUCCGAUCUCUCCUA 5'

 -8.10 2 RIC-seq
chrX:139866424:139866440:[+] chr5:141976328:141976343:[+] nonBSJ supported Intron

circRNA 5':GUCUUCCAACAAAGGUA 3'


            ||||| |:|||


target  3':AAGAAGAAUA--UUCAUC 5'

 -5.40 2 RIC-seq
chrX:139866473:139866542:[+] chr5:142013036:142013105:[+] nonBSJ supported Intron

circRNA 5':GGUAUGUCUUCCAA-----------CAAAGGUACGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUCUU---------------------CCAGAA 3'


            |||||||||| |||||| || |||||| |||| |||:|


target  3': CAUACAGAAGUCUCCUUCAAAUCCGUUUCC----------------------------UUCGUUCGG---AGAAAAAAUGUUCCUCUAAAACUGUGGUUUC 5'

 -24.10 1 RIC-seq