Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866418:139866440:[+] chrX:73042764:73042787:[-] nonBSJ supported Exon

circRNA 5':ACUUGUGUCUUCCAACA-AAGGUA 3'


            |:||||| ||||| || |||:||


target  3':AGGACACA-AAGGUGGUAUUCUAUU 5'

 -19.00 2 RIC-seq
chrX:139866418:139866441:[+] chrX:73042764:73042787:[-] nonBSJ supported Exon

circRNA 5':ACUUGUGUCUUCCAACA-AAGGUAC 3'


            |:||||| ||||| || |||:||


target  3':AGGACACA-AAGGUGGUAUUCUAUU 5'

 -19.50 7 RIC-seq
chrX:139866420:139866441:[+] chrX:73042765:73042787:[-] nonBSJ supported Exon

circRNA 5': UUGUGUCUUCCAACA-AAGGUAC 3'


            |||||| ||||| || |||:||


target  3':GGACACA-AAGGUGGUAUUCUAUU 5'

 -16.60 1 RIC-seq