Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865861:139865919:[+]	chr10:11072768:11072829:[+]	nonBSJ supported	Exon	circRNA 5':CGUCUUCCACCAAA-UCCAGGUCUUCCAGUCAAUCCACAU-CUUCCGGAAAA--AAUCCAGGU 3' \|\|\|\|: \|\| \|\|\| \|:\|\|\|\|\|\|\|:\| \|\|: \|\|\|\| \|\|\|\| \|\|: target 3':ACAGAGAAUGUUACGAGGA-CGGAAGGUCGGAGUCUUUAACGAGAUACUUUAUGUUAGUUCUU 5'	-32.70	1	RIC-seq
chrX:139865870:139865919:[+]	chr10:11072768:11072821:[+]	nonBSJ supported	Exon	circRNA 5':CCAAA--UCCAGGUCUUCCAGUCAAUCCACAU-CUUCCGGAAAA--AAUCCAGGU 3' \|\|\| \|\|\| \|:\|\|\|\|\|\|\|:\| \|\|: \|\|\|\| \|\|\|\| \|\|: target 3':UGUUACGAGGA-CGGAAGGUCGGAGUCUUUAACGAGAUACUUUAUGUUAGUUCUU 5'	-26.80	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139865861:139865919:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC
chrX:139865870:139865919:[+]	circRNA	-	chrX:139865903-139865904	C>T	LINC-JP	ICGC