Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866602:139866639:[+] chr16:18027078:18027105:[+] nonBSJ supported Exon

circRNA 5':AUGUCUUCCUAUAUCUCCAGGUCUUCCAGCAUCUCCAG 3'


            ||||:|||: ||||||||||||


target  3':AACAGGAGGGACAAC----------GGUCGUAGAGGUG 5'

 -33.10 10 RIC-seq
chrX:139866675:139866709:[+] chr16:18027081:18027104:[+] nonBSJ supported Exon

circRNA 5':CGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUC 3'


            |||:||| |||| |||||||||:


target  3':ACAGGAGG-------GACAAC---GGUCGUAGAG 5'

 -28.10 1 RIC-seq
chrX:139866675:139866710:[+] chr16:18027080:18027104:[+] nonBSJ supported Exon

circRNA 5':CGUCUUCCAGCAUCUCUGUGUCUUCCAGCAUCUUCA 3'


            |||:||| |||| |||||||||:|


target  3':ACAGGAGG-------GACAAC---GGUCGUAGAGG 5'

 -31.70 11 RIC-seq