Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866678:139866732:[+] chr4:83416879:83416927:[-] nonBSJ supported Exon

circRNA 5':CUUCCAGCAUCUCUGUGUCUU-CCAGCAUCUUCAUGUCUUCCAACAACUACCCAGU 3'


            |||| ||:| ||| || ||| ||| :|||||| :||||||


target  3':CAAGG--GUGGUGACUAAGCCUGGU-GUAUUG----GGAAGGUAAGAAGUGGGUCU 5'

 -33.50 1 RIC-seq
chrX:139866679:139866732:[+] chr4:83416881:83416927:[-] nonBSJ supported Exon

circRNA 5':UUCCAGCAUCUCUGUGUCUU-CCAGCAUCUUCAUGUCUUCCAACAACUACCCAGU 3'


            ||| ||:| ||| || ||| ||| :|||||| :||||||


target  3': AGG--GUGGUGACUAAGCCUGGU-GUAUUG----GGAAGGUAAGAAGUGGGUCU 5'

 -32.10 2 RIC-seq