Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866412:139866440:[+] chr14:96558267:96558288:[+] nonBSJ supported 3UTR

circRNA 5':CAGCCUACUU-GUGUCUUCCAACAAAGGUA 3'


            |:||:| :|| ||: |||||


target  3':UUUGGGUCAUUUAC-GAG------UUCCA 5'

 -11.80 1 RIC-seq
chrX:139866416:139866476:[+] chr14:96558267:96558312:[+] nonBSJ supported 3UTR

circRNA 5':CUACUUG-UGUCUUCCAAC-AAAGGUACGUCUUCCAACAAAGGUACGUCUUCCAACAAAGGUA 3'


            ||||| : |||||| ||||: || : :||| :| :|| |||||


target  3':AGUGAAAGGGAGAAGGAGUUUUUCUUUGGG-----------UCAUUUACGAG-----UUCCA 5'

 -20.20 14 RIC-seq
chrX:139866157:139866183:[+] chr14:96554761:96554795:[+] nonBSJ supported 5UTR

circRNA 5':UUCCAGAAAA----UCCUUGUCU----UCCCUUAA 3'


            |||||| ||| ||||: |||||:|


target  3':AAGGUCUGUCCACCAGGUACAGGGAAGAGGGAGUA 5'

 -26.00 4 RIC-seq
chrX:139866158:139866183:[+] chr14:96554761:96554793:[+] nonBSJ supported 5UTR

circRNA 5':UCCAGAAAA----UCCUUGUCU----UCCCUUAA 3'


            ||||| ||| ||||: |||||:|


target  3': GGUCUGUCCACCAGGUACAGGGAAGAGGGAGUA 5'

 -23.20 1 RIC-seq
chrX:139866158:139866183:[+] chr14:96554761:96554795:[+] nonBSJ supported 5UTR

circRNA 5': UCCAGAAAA----UCCUUGUCU----UCCCUUAA 3'


            |||||| ||| ||||: |||||:|


target  3':AAGGUCUGUCCACCAGGUACAGGGAAGAGGGAGUA 5'

 -25.80 14 RIC-seq
chrX:139866159:139866180:[+] chr14:96554765:96554789:[+] nonBSJ supported 5UTR

circRNA 5':CCAGAAAAUCCUUGUCU----UCCCU 3'


            ||| ||| ||||: ||||


target  3':UGUCCACCAGGUACAGGGAAGAGGG 5'

 -17.40 1 RIC-seq
chrX:139866159:139866183:[+] chr14:96554761:96554794:[+] nonBSJ supported 5UTR

circRNA 5': CCAGAAAA----UCCUUGUCU----UCCCUUAA 3'


            ||||| ||| ||||: |||||:|


target  3':AGGUCUGUCCACCAGGUACAGGGAAGAGGGAGUA 5'

 -24.20 3 RIC-seq
chrX:139866160:139866183:[+] chr14:96554761:96554793:[+] nonBSJ supported 5UTR

circRNA 5': CAGAAAA----UCCUUGUCU----UCCCUUAA 3'


            |||| ||| ||||: |||||:|


target  3':GGUCUGUCCACCAGGUACAGGGAAGAGGGAGUA 5'

 -21.10 1 RIC-seq