Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866621:139866643:[+] chr17:79002982:79003004:[-] nonBSJ supported Exon

circRNA 5':GGUCUUCCAGCAUCU-CCAGGGCU 3'


            |||||| ||| |||||:|:


target  3': CAGAAGAAAG-AGAGGGUCCUGGG 5'

 -23.10 1 RIC-seq
chrX:139866621:139866648:[+] chr17:79002982:79003006:[-] nonBSJ supported Exon

circRNA 5':GGUCUUCCAGCAUCU-CCAGGGCUUCCAG 3'


            |||||| ||| |||||:| :|||


target  3': CAGAAGAAAG-AGAGGGUCCUG-GGGU 5'

 -26.60 1 RIC-seq
chrX:139866621:139866650:[+] chr17:79002982:79003009:[-] nonBSJ supported Exon

circRNA 5':GGUCUUCCAGCAUCU-CCAGGGCUUCCAGCA 3'


            |||||| ||| |||||:| :||| |


target  3': CAGAAGAAAG-AGAGGGUCCUG-GGGUGGG 5'

 -29.10 25 RIC-seq